Gene : Medtr8g063450 M. truncatula Mt4.0v1
Defline:  (1 of 210) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Description:  PPR containing plant-like protein
Genomic Order:  3157 Name:  ? Medtr8g063450
Secondary Identifier:  ? PAC:31069772
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g063450 0.5kb upstream 0.5kb upstream 2725   true chr8: 26602439-26605163 Medicago truncatula
Medtr8g063450 0.5kb upstream 0.5kb upstream 500   false chr8: 26602439-26602938 Medicago truncatula
Medtr8g063450 0.5kb downstream 0.5kb downstream 2725   true chr8: 26602939-26605663 Medicago truncatula
Medtr8g063450 0.5kb downstream 0.5kb downstream 500   false chr8: 26605164-26605663 Medicago truncatula
Medtr8g063450 1.0kb upstream 1.0kb upstream 3225   true chr8: 26601939-26605163 Medicago truncatula
Medtr8g063450 1.0kb upstream 1.0kb upstream 1000   false chr8: 26601939-26602938 Medicago truncatula
Medtr8g063450 1.0kb downstream 1.0kb downstream 3225   true chr8: 26602939-26606163 Medicago truncatula
Medtr8g063450 1.0kb downstream 1.0kb downstream 1000   false chr8: 26605164-26606163 Medicago truncatula
Medtr8g063450 2.0kb upstream 2.0kb upstream 4225   true chr8: 26600939-26605163 Medicago truncatula
Medtr8g063450 2.0kb upstream 2.0kb upstream 2000   false chr8: 26600939-26602938 Medicago truncatula
Medtr8g063450 2.0kb downstream 2.0kb downstream 4225   true chr8: 26602939-26607163 Medicago truncatula
Medtr8g063450 2.0kb downstream 2.0kb downstream 2000   false chr8: 26605164-26607163 Medicago truncatula
Medtr8g063450 5.0kb upstream 5.0kb upstream 7225   true chr8: 26597939-26605163 Medicago truncatula
Medtr8g063450 5.0kb upstream 5.0kb upstream 5000   false chr8: 26597939-26602938 Medicago truncatula
Medtr8g063450 5.0kb downstream 5.0kb downstream 7225   true chr8: 26602939-26610163 Medicago truncatula
Medtr8g063450 5.0kb downstream 5.0kb downstream 5000   false chr8: 26605164-26610163 Medicago truncatula
Medtr8g063450 10.0kb upstream 10.0kb upstream 12225   true chr8: 26592939-26605163 Medicago truncatula
Medtr8g063450 10.0kb upstream 10.0kb upstream 10000   false chr8: 26592939-26602938 Medicago truncatula
Medtr8g063450 10.0kb downstream 10.0kb downstream 12225   true chr8: 26602939-26615163 Medicago truncatula
Medtr8g063450 10.0kb downstream 10.0kb downstream 10000   false chr8: 26605164-26615163 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026168 5273 Angiosperm View MSA
122307514 5265 Fabidae View MSA
124060726 5270 Rosid View MSA
123739079 5271 Pentapetalae View MSA
122791557 5272 Eudicot View MSA
121296211 5274 Embryophyte View MSA
123334413 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.205        
cufflinks 0.096        
cufflinks 0.153        
cufflinks 0.011     Low Low
cufflinks 0.41       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.174        
cufflinks 0.22        
cufflinks 0.122        

0 Strain