Gene : Medtr8g065730 M. truncatula Mt4.0v1
Defline:  (1 of 67) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Description:  PPR containing plant-like protein
Genomic Order:  3260 Name:  ? Medtr8g065730
Secondary Identifier:  ? PAC:31076447
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g065730 0.5kb upstream 0.5kb upstream 2747   true chr8: 27332422-27335168 Medicago truncatula
Medtr8g065730 0.5kb upstream 0.5kb upstream 500   false chr8: 27332422-27332921 Medicago truncatula
Medtr8g065730 0.5kb downstream 0.5kb downstream 2747   true chr8: 27332922-27335668 Medicago truncatula
Medtr8g065730 0.5kb downstream 0.5kb downstream 500   false chr8: 27335169-27335668 Medicago truncatula
Medtr8g065730 1.0kb upstream 1.0kb upstream 3247   true chr8: 27331922-27335168 Medicago truncatula
Medtr8g065730 1.0kb upstream 1.0kb upstream 1000   false chr8: 27331922-27332921 Medicago truncatula
Medtr8g065730 1.0kb downstream 1.0kb downstream 3247   true chr8: 27332922-27336168 Medicago truncatula
Medtr8g065730 1.0kb downstream 1.0kb downstream 1000   false chr8: 27335169-27336168 Medicago truncatula
Medtr8g065730 2.0kb upstream 2.0kb upstream 4247   true chr8: 27330922-27335168 Medicago truncatula
Medtr8g065730 2.0kb upstream 2.0kb upstream 2000   false chr8: 27330922-27332921 Medicago truncatula
Medtr8g065730 2.0kb downstream 2.0kb downstream 4247   true chr8: 27332922-27337168 Medicago truncatula
Medtr8g065730 2.0kb downstream 2.0kb downstream 2000   false chr8: 27335169-27337168 Medicago truncatula
Medtr8g065730 5.0kb upstream 5.0kb upstream 7247   true chr8: 27327922-27335168 Medicago truncatula
Medtr8g065730 5.0kb upstream 5.0kb upstream 5000   false chr8: 27327922-27332921 Medicago truncatula
Medtr8g065730 5.0kb downstream 5.0kb downstream 7247   true chr8: 27332922-27340168 Medicago truncatula
Medtr8g065730 5.0kb downstream 5.0kb downstream 5000   false chr8: 27335169-27340168 Medicago truncatula
Medtr8g065730 10.0kb upstream 10.0kb upstream 12247   true chr8: 27322922-27335168 Medicago truncatula
Medtr8g065730 10.0kb upstream 10.0kb upstream 10000   false chr8: 27322922-27332921 Medicago truncatula
Medtr8g065730 10.0kb downstream 10.0kb downstream 12247   true chr8: 27332922-27345168 Medicago truncatula
Medtr8g065730 10.0kb downstream 10.0kb downstream 10000   false chr8: 27335169-27345168 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306246 5265 Fabidae View MSA
124072363 5270 Rosid View MSA
123740411 5271 Pentapetalae View MSA
122793387 5272 Eudicot View MSA
122048876 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.586        
cufflinks 0.628        
cufflinks 1.048        
cufflinks 0.063     Low Low
cufflinks 0.972        
cufflinks 0.498        
cufflinks 0.599        
cufflinks 0.724        
cufflinks 0.336        

0 Strain