Gene : Medtr8g065010 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31375:SF34 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Description:  polygalacturonase plant-like protein
Genomic Order:  3254 Name:  ? Medtr8g065010
Secondary Identifier:  ? PAC:31069837
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-1081 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g065010 0.5kb upstream 0.5kb upstream 4392   true chr8: 27295111-27299502 Medicago truncatula
Medtr8g065010 0.5kb upstream 0.5kb upstream 500   false chr8: 27299003-27299502 Medicago truncatula
Medtr8g065010 0.5kb downstream 0.5kb downstream 4392   true chr8: 27294611-27299002 Medicago truncatula
Medtr8g065010 0.5kb downstream 0.5kb downstream 500   false chr8: 27294611-27295110 Medicago truncatula
Medtr8g065010 1.0kb upstream 1.0kb upstream 4892   true chr8: 27295111-27300002 Medicago truncatula
Medtr8g065010 1.0kb upstream 1.0kb upstream 1000   false chr8: 27299003-27300002 Medicago truncatula
Medtr8g065010 1.0kb downstream 1.0kb downstream 4892   true chr8: 27294111-27299002 Medicago truncatula
Medtr8g065010 1.0kb downstream 1.0kb downstream 1000   false chr8: 27294111-27295110 Medicago truncatula
Medtr8g065010 2.0kb upstream 2.0kb upstream 5892   true chr8: 27295111-27301002 Medicago truncatula
Medtr8g065010 2.0kb upstream 2.0kb upstream 2000   false chr8: 27299003-27301002 Medicago truncatula
Medtr8g065010 2.0kb downstream 2.0kb downstream 5892   true chr8: 27293111-27299002 Medicago truncatula
Medtr8g065010 2.0kb downstream 2.0kb downstream 2000   false chr8: 27293111-27295110 Medicago truncatula
Medtr8g065010 5.0kb upstream 5.0kb upstream 8892   true chr8: 27295111-27304002 Medicago truncatula
Medtr8g065010 5.0kb upstream 5.0kb upstream 5000   false chr8: 27299003-27304002 Medicago truncatula
Medtr8g065010 5.0kb downstream 5.0kb downstream 8892   true chr8: 27290111-27299002 Medicago truncatula
Medtr8g065010 5.0kb downstream 5.0kb downstream 5000   false chr8: 27290111-27295110 Medicago truncatula
Medtr8g065010 10.0kb upstream 10.0kb upstream 13892   true chr8: 27295111-27309002 Medicago truncatula
Medtr8g065010 10.0kb upstream 10.0kb upstream 10000   false chr8: 27299003-27309002 Medicago truncatula
Medtr8g065010 10.0kb downstream 10.0kb downstream 13892   true chr8: 27285111-27299002 Medicago truncatula
Medtr8g065010 10.0kb downstream 10.0kb downstream 10000   false chr8: 27285111-27295110 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295475 5265 Fabidae View MSA
124069047 5270 Rosid View MSA
123746876 5271 Pentapetalae View MSA
122793930 5272 Eudicot View MSA
122049793 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.004     Low Low
cufflinks 0.18       High
cufflinks 0.178        
cufflinks 0.006     Low Low
cufflinks 0.098        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.116        
cufflinks 0.034     Low  

0 Strain