Gene : Medtr8g039980 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR12383//PTHR12383:SF23 - PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED Description:  inner membrane protease subunit-like protein
Genomic Order:  1956 Name:  ? Medtr8g039980
Secondary Identifier:  ? PAC:31074775
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g039980 0.5kb upstream 0.5kb upstream 3789   true chr8: 14865761-14869549 Medicago truncatula
Medtr8g039980 0.5kb upstream 0.5kb upstream 500   false chr8: 14865761-14866260 Medicago truncatula
Medtr8g039980 0.5kb downstream 0.5kb downstream 3789   true chr8: 14866261-14870049 Medicago truncatula
Medtr8g039980 0.5kb downstream 0.5kb downstream 500   false chr8: 14869550-14870049 Medicago truncatula
Medtr8g039980 1.0kb upstream 1.0kb upstream 4289   true chr8: 14865261-14869549 Medicago truncatula
Medtr8g039980 1.0kb upstream 1.0kb upstream 1000   false chr8: 14865261-14866260 Medicago truncatula
Medtr8g039980 1.0kb downstream 1.0kb downstream 4289   true chr8: 14866261-14870549 Medicago truncatula
Medtr8g039980 1.0kb downstream 1.0kb downstream 1000   false chr8: 14869550-14870549 Medicago truncatula
Medtr8g039980 2.0kb upstream 2.0kb upstream 5289   true chr8: 14864261-14869549 Medicago truncatula
Medtr8g039980 2.0kb upstream 2.0kb upstream 2000   false chr8: 14864261-14866260 Medicago truncatula
Medtr8g039980 2.0kb downstream 2.0kb downstream 5289   true chr8: 14866261-14871549 Medicago truncatula
Medtr8g039980 2.0kb downstream 2.0kb downstream 2000   false chr8: 14869550-14871549 Medicago truncatula
Medtr8g039980 5.0kb upstream 5.0kb upstream 8289   true chr8: 14861261-14869549 Medicago truncatula
Medtr8g039980 5.0kb upstream 5.0kb upstream 5000   false chr8: 14861261-14866260 Medicago truncatula
Medtr8g039980 5.0kb downstream 5.0kb downstream 8289   true chr8: 14866261-14874549 Medicago truncatula
Medtr8g039980 5.0kb downstream 5.0kb downstream 5000   false chr8: 14869550-14874549 Medicago truncatula
Medtr8g039980 10.0kb upstream 10.0kb upstream 13289   true chr8: 14856261-14869549 Medicago truncatula
Medtr8g039980 10.0kb upstream 10.0kb upstream 10000   false chr8: 14856261-14866260 Medicago truncatula
Medtr8g039980 10.0kb downstream 10.0kb downstream 13289   true chr8: 14866261-14879549 Medicago truncatula
Medtr8g039980 10.0kb downstream 10.0kb downstream 10000   false chr8: 14869550-14879549 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298262 5265 Fabidae View MSA
124064191 5270 Rosid View MSA
123740275 5271 Pentapetalae View MSA
122796952 5272 Eudicot View MSA
122051695 5273 Angiosperm View MSA
123428894 5275 Viridiplantae View MSA
121348112 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.551        
cufflinks 1.096       Low
cufflinks 1.56        
cufflinks 3.161       High
cufflinks 1.175       Low
cufflinks 2.746        
cufflinks 2.361        
cufflinks 1.278        
cufflinks 2.198        

0 Strain