Gene : Medtr8g041400 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR19321:SF4 - 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 5 Description:  microtubule associated protein, MAP65/ASE1 family protein
Genomic Order:  2036 Name:  ? Medtr8g041400
Secondary Identifier:  ? PAC:31075009
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g041400 0.5kb upstream 0.5kb upstream 8622   true chr8: 15575049-15583670 Medicago truncatula
Medtr8g041400 0.5kb upstream 0.5kb upstream 500   false chr8: 15583171-15583670 Medicago truncatula
Medtr8g041400 0.5kb downstream 0.5kb downstream 8622   true chr8: 15574549-15583170 Medicago truncatula
Medtr8g041400 0.5kb downstream 0.5kb downstream 500   false chr8: 15574549-15575048 Medicago truncatula
Medtr8g041400 1.0kb upstream 1.0kb upstream 9122   true chr8: 15575049-15584170 Medicago truncatula
Medtr8g041400 1.0kb upstream 1.0kb upstream 1000   false chr8: 15583171-15584170 Medicago truncatula
Medtr8g041400 1.0kb downstream 1.0kb downstream 9122   true chr8: 15574049-15583170 Medicago truncatula
Medtr8g041400 1.0kb downstream 1.0kb downstream 1000   false chr8: 15574049-15575048 Medicago truncatula
Medtr8g041400 2.0kb upstream 2.0kb upstream 10122   true chr8: 15575049-15585170 Medicago truncatula
Medtr8g041400 2.0kb upstream 2.0kb upstream 2000   false chr8: 15583171-15585170 Medicago truncatula
Medtr8g041400 2.0kb downstream 2.0kb downstream 10122   true chr8: 15573049-15583170 Medicago truncatula
Medtr8g041400 2.0kb downstream 2.0kb downstream 2000   false chr8: 15573049-15575048 Medicago truncatula
Medtr8g041400 5.0kb upstream 5.0kb upstream 13122   true chr8: 15575049-15588170 Medicago truncatula
Medtr8g041400 5.0kb upstream 5.0kb upstream 5000   false chr8: 15583171-15588170 Medicago truncatula
Medtr8g041400 5.0kb downstream 5.0kb downstream 13122   true chr8: 15570049-15583170 Medicago truncatula
Medtr8g041400 5.0kb downstream 5.0kb downstream 5000   false chr8: 15570049-15575048 Medicago truncatula
Medtr8g041400 10.0kb upstream 10.0kb upstream 18122   true chr8: 15575049-15593170 Medicago truncatula
Medtr8g041400 10.0kb upstream 10.0kb upstream 10000   false chr8: 15583171-15593170 Medicago truncatula
Medtr8g041400 10.0kb downstream 10.0kb downstream 18122   true chr8: 15565049-15583170 Medicago truncatula
Medtr8g041400 10.0kb downstream 10.0kb downstream 10000   false chr8: 15565049-15575048 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305841 5265 Fabidae View MSA
124060711 5270 Rosid View MSA
123739760 5271 Pentapetalae View MSA
122787867 5272 Eudicot View MSA
122048395 5273 Angiosperm View MSA
121310952 5274 Embryophyte View MSA
123428292 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.151        
cufflinks 0.281       High
cufflinks 0.128        
cufflinks 0.058     Low  
cufflinks 0.201        
cufflinks 0.023     Low Low
cufflinks 0.131        
cufflinks 0.137        
cufflinks 0.146        

0 Strain