Gene : Medtr8g100045 M. truncatula Mt4.0v1
Defline:  (1 of 4) 6.3.5.3 - Phosphoribosylformylglycinamidine synthase / Phosphoribosylformylglycinamidine synthetase Description:  phosphoribosylformylglycinamidine synthase
Genomic Order:  5353 Name:  ? Medtr8g100045
Secondary Identifier:  ? PAC:31072303
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6121 Medicago truncatula pathologic  
Mtruncatula PWY-841 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g100045 0.5kb upstream 0.5kb upstream 10647   true chr8: 42382325-42392971 Medicago truncatula
Medtr8g100045 0.5kb upstream 0.5kb upstream 500   false chr8: 42392472-42392971 Medicago truncatula
Medtr8g100045 0.5kb downstream 0.5kb downstream 10647   true chr8: 42381825-42392471 Medicago truncatula
Medtr8g100045 0.5kb downstream 0.5kb downstream 500   false chr8: 42381825-42382324 Medicago truncatula
Medtr8g100045 1.0kb upstream 1.0kb upstream 11147   true chr8: 42382325-42393471 Medicago truncatula
Medtr8g100045 1.0kb upstream 1.0kb upstream 1000   false chr8: 42392472-42393471 Medicago truncatula
Medtr8g100045 1.0kb downstream 1.0kb downstream 11147   true chr8: 42381325-42392471 Medicago truncatula
Medtr8g100045 1.0kb downstream 1.0kb downstream 1000   false chr8: 42381325-42382324 Medicago truncatula
Medtr8g100045 2.0kb upstream 2.0kb upstream 12147   true chr8: 42382325-42394471 Medicago truncatula
Medtr8g100045 2.0kb upstream 2.0kb upstream 2000   false chr8: 42392472-42394471 Medicago truncatula
Medtr8g100045 2.0kb downstream 2.0kb downstream 12147   true chr8: 42380325-42392471 Medicago truncatula
Medtr8g100045 2.0kb downstream 2.0kb downstream 2000   false chr8: 42380325-42382324 Medicago truncatula
Medtr8g100045 5.0kb upstream 5.0kb upstream 15147   true chr8: 42382325-42397471 Medicago truncatula
Medtr8g100045 5.0kb upstream 5.0kb upstream 5000   false chr8: 42392472-42397471 Medicago truncatula
Medtr8g100045 5.0kb downstream 5.0kb downstream 15147   true chr8: 42377325-42392471 Medicago truncatula
Medtr8g100045 5.0kb downstream 5.0kb downstream 5000   false chr8: 42377325-42382324 Medicago truncatula
Medtr8g100045 10.0kb upstream 10.0kb upstream 20147   true chr8: 42382325-42402471 Medicago truncatula
Medtr8g100045 10.0kb upstream 10.0kb upstream 10000   false chr8: 42392472-42402471 Medicago truncatula
Medtr8g100045 10.0kb downstream 10.0kb downstream 20147   true chr8: 42372325-42392471 Medicago truncatula
Medtr8g100045 10.0kb downstream 10.0kb downstream 10000   false chr8: 42372325-42382324 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301491 5265 Fabidae View MSA
124062786 5270 Rosid View MSA
123736916 5271 Pentapetalae View MSA
122788204 5272 Eudicot View MSA
122046400 5273 Angiosperm View MSA
121347148 5274 Embryophyte View MSA
123424914 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.004        
cufflinks 0.811        
cufflinks 1.14        
cufflinks 0.698        
cufflinks 1.065        
cufflinks 0.36       Low
cufflinks 1.035        
cufflinks 0.87        
cufflinks 1.012        

0 Strain