Gene : Medtr8g100050 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31384:SF8 - AUXIN RESPONSE FACTOR 2 Description:  auxin response factor 2
Genomic Order:  5051 Name:  ? Medtr8g100050
Secondary Identifier:  ? PAC:31071295
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g100050 0.5kb upstream 0.5kb upstream 5462   true chr8: 40230369-40235830 Medicago truncatula
Medtr8g100050 0.5kb upstream 0.5kb upstream 500   false chr8: 40230369-40230868 Medicago truncatula
Medtr8g100050 0.5kb downstream 0.5kb downstream 5462   true chr8: 40230869-40236330 Medicago truncatula
Medtr8g100050 0.5kb downstream 0.5kb downstream 500   false chr8: 40235831-40236330 Medicago truncatula
Medtr8g100050 1.0kb upstream 1.0kb upstream 5962   true chr8: 40229869-40235830 Medicago truncatula
Medtr8g100050 1.0kb upstream 1.0kb upstream 1000   false chr8: 40229869-40230868 Medicago truncatula
Medtr8g100050 1.0kb downstream 1.0kb downstream 5962   true chr8: 40230869-40236830 Medicago truncatula
Medtr8g100050 1.0kb downstream 1.0kb downstream 1000   false chr8: 40235831-40236830 Medicago truncatula
Medtr8g100050 2.0kb upstream 2.0kb upstream 6962   true chr8: 40228869-40235830 Medicago truncatula
Medtr8g100050 2.0kb upstream 2.0kb upstream 2000   false chr8: 40228869-40230868 Medicago truncatula
Medtr8g100050 2.0kb downstream 2.0kb downstream 6962   true chr8: 40230869-40237830 Medicago truncatula
Medtr8g100050 2.0kb downstream 2.0kb downstream 2000   false chr8: 40235831-40237830 Medicago truncatula
Medtr8g100050 5.0kb upstream 5.0kb upstream 9962   true chr8: 40225869-40235830 Medicago truncatula
Medtr8g100050 5.0kb upstream 5.0kb upstream 5000   false chr8: 40225869-40230868 Medicago truncatula
Medtr8g100050 5.0kb downstream 5.0kb downstream 9962   true chr8: 40230869-40240830 Medicago truncatula
Medtr8g100050 5.0kb downstream 5.0kb downstream 5000   false chr8: 40235831-40240830 Medicago truncatula
Medtr8g100050 10.0kb upstream 10.0kb upstream 14962   true chr8: 40220869-40235830 Medicago truncatula
Medtr8g100050 10.0kb upstream 10.0kb upstream 10000   false chr8: 40220869-40230868 Medicago truncatula
Medtr8g100050 10.0kb downstream 10.0kb downstream 14962   true chr8: 40230869-40245830 Medicago truncatula
Medtr8g100050 10.0kb downstream 10.0kb downstream 10000   false chr8: 40235831-40245830 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300136 5265 Fabidae View MSA
124074204 5270 Rosid View MSA
123738265 5271 Pentapetalae View MSA
122792462 5272 Eudicot View MSA
122051461 5273 Angiosperm View MSA
121348224 5274 Embryophyte View MSA
123380779 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.443     High High
cufflinks 37.351     High  
cufflinks 36.432     High  
cufflinks 11.161     High Low
cufflinks 40.783     High  
cufflinks 7.865       Low
cufflinks 21.993     High  
cufflinks 32.761     High  
cufflinks 15.704     High  

0 Strain