Gene : Medtr8g092870 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN Description:  plant U-box protein
Genomic Order:  4871 Name:  ? Medtr8g092870
Secondary Identifier:  ? PAC:31072740
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7511 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g092870 0.5kb upstream 0.5kb upstream 1990   true chr8: 38934633-38936622 Medicago truncatula
Medtr8g092870 0.5kb upstream 0.5kb upstream 500   false chr8: 38934633-38935132 Medicago truncatula
Medtr8g092870 0.5kb downstream 0.5kb downstream 1990   true chr8: 38935133-38937122 Medicago truncatula
Medtr8g092870 0.5kb downstream 0.5kb downstream 500   false chr8: 38936623-38937122 Medicago truncatula
Medtr8g092870 1.0kb upstream 1.0kb upstream 2490   true chr8: 38934133-38936622 Medicago truncatula
Medtr8g092870 1.0kb upstream 1.0kb upstream 1000   false chr8: 38934133-38935132 Medicago truncatula
Medtr8g092870 1.0kb downstream 1.0kb downstream 2490   true chr8: 38935133-38937622 Medicago truncatula
Medtr8g092870 1.0kb downstream 1.0kb downstream 1000   false chr8: 38936623-38937622 Medicago truncatula
Medtr8g092870 2.0kb upstream 2.0kb upstream 3490   true chr8: 38933133-38936622 Medicago truncatula
Medtr8g092870 2.0kb upstream 2.0kb upstream 2000   false chr8: 38933133-38935132 Medicago truncatula
Medtr8g092870 2.0kb downstream 2.0kb downstream 3490   true chr8: 38935133-38938622 Medicago truncatula
Medtr8g092870 2.0kb downstream 2.0kb downstream 2000   false chr8: 38936623-38938622 Medicago truncatula
Medtr8g092870 5.0kb upstream 5.0kb upstream 6490   true chr8: 38930133-38936622 Medicago truncatula
Medtr8g092870 5.0kb upstream 5.0kb upstream 5000   false chr8: 38930133-38935132 Medicago truncatula
Medtr8g092870 5.0kb downstream 5.0kb downstream 6490   true chr8: 38935133-38941622 Medicago truncatula
Medtr8g092870 5.0kb downstream 5.0kb downstream 5000   false chr8: 38936623-38941622 Medicago truncatula
Medtr8g092870 10.0kb upstream 10.0kb upstream 11490   true chr8: 38925133-38936622 Medicago truncatula
Medtr8g092870 10.0kb upstream 10.0kb upstream 10000   false chr8: 38925133-38935132 Medicago truncatula
Medtr8g092870 10.0kb downstream 10.0kb downstream 11490   true chr8: 38935133-38946622 Medicago truncatula
Medtr8g092870 10.0kb downstream 10.0kb downstream 10000   false chr8: 38936623-38946622 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312368 5265 Fabidae View MSA
124071729 5270 Rosid View MSA
123744205 5271 Pentapetalae View MSA
122785881 5272 Eudicot View MSA
122041845 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.462        
cufflinks 3.843        
cufflinks 5.129        
cufflinks 6.308        
cufflinks 5.255        
cufflinks 0.911       Low
cufflinks 4.149        
cufflinks 3.192        
cufflinks 4.758        

0 Strain