Gene : Medtr8g095440 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR24349:SF166 - CALCIUM-DEPENDENT PROTEIN KINASE 11-RELATED Description:  calmodulin-domain kinase CDPK protein
Genomic Order:  5007 Name:  ? Medtr8g095440
Secondary Identifier:  ? PAC:31073956
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g095440 0.5kb upstream 0.5kb upstream 5410   true chr8: 39939163-39944572 Medicago truncatula
Medtr8g095440 0.5kb upstream 0.5kb upstream 500   false chr8: 39939163-39939662 Medicago truncatula
Medtr8g095440 0.5kb downstream 0.5kb downstream 5410   true chr8: 39939663-39945072 Medicago truncatula
Medtr8g095440 0.5kb downstream 0.5kb downstream 500   false chr8: 39944573-39945072 Medicago truncatula
Medtr8g095440 1.0kb upstream 1.0kb upstream 5910   true chr8: 39938663-39944572 Medicago truncatula
Medtr8g095440 1.0kb upstream 1.0kb upstream 1000   false chr8: 39938663-39939662 Medicago truncatula
Medtr8g095440 1.0kb downstream 1.0kb downstream 5910   true chr8: 39939663-39945572 Medicago truncatula
Medtr8g095440 1.0kb downstream 1.0kb downstream 1000   false chr8: 39944573-39945572 Medicago truncatula
Medtr8g095440 2.0kb upstream 2.0kb upstream 6910   true chr8: 39937663-39944572 Medicago truncatula
Medtr8g095440 2.0kb upstream 2.0kb upstream 2000   false chr8: 39937663-39939662 Medicago truncatula
Medtr8g095440 2.0kb downstream 2.0kb downstream 6910   true chr8: 39939663-39946572 Medicago truncatula
Medtr8g095440 2.0kb downstream 2.0kb downstream 2000   false chr8: 39944573-39946572 Medicago truncatula
Medtr8g095440 5.0kb upstream 5.0kb upstream 9910   true chr8: 39934663-39944572 Medicago truncatula
Medtr8g095440 5.0kb upstream 5.0kb upstream 5000   false chr8: 39934663-39939662 Medicago truncatula
Medtr8g095440 5.0kb downstream 5.0kb downstream 9910   true chr8: 39939663-39949572 Medicago truncatula
Medtr8g095440 5.0kb downstream 5.0kb downstream 5000   false chr8: 39944573-39949572 Medicago truncatula
Medtr8g095440 10.0kb upstream 10.0kb upstream 14910   true chr8: 39929663-39944572 Medicago truncatula
Medtr8g095440 10.0kb upstream 10.0kb upstream 10000   false chr8: 39929663-39939662 Medicago truncatula
Medtr8g095440 10.0kb downstream 10.0kb downstream 14910   true chr8: 39939663-39954572 Medicago truncatula
Medtr8g095440 10.0kb downstream 10.0kb downstream 10000   false chr8: 39944573-39954572 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311045 5265 Fabidae View MSA
124069708 5270 Rosid View MSA
123741053 5271 Pentapetalae View MSA
122787584 5272 Eudicot View MSA
122047311 5273 Angiosperm View MSA
121310726 5274 Embryophyte View MSA
123427978 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.395     High High
cufflinks 4.753        
cufflinks 7.417        
cufflinks 3.884       Low
cufflinks 6.818        
cufflinks 5.338        
cufflinks 19.937     High High
cufflinks 5.883        
cufflinks 13.862     High  

0 Strain