Gene : Medtr8g089420 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR24351:SF60 - PROTEIN KINASE PINOID Description:  Serine/Threonine kinase family protein
Genomic Order:  4614 Name:  ? Medtr8g089420
Secondary Identifier:  ? PAC:31071816
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g089420 0.5kb upstream 0.5kb upstream 2075   true chr8: 37169352-37171426 Medicago truncatula
Medtr8g089420 0.5kb upstream 0.5kb upstream 500   false chr8: 37169352-37169851 Medicago truncatula
Medtr8g089420 0.5kb downstream 0.5kb downstream 2075   true chr8: 37169852-37171926 Medicago truncatula
Medtr8g089420 0.5kb downstream 0.5kb downstream 500   false chr8: 37171427-37171926 Medicago truncatula
Medtr8g089420 1.0kb upstream 1.0kb upstream 2575   true chr8: 37168852-37171426 Medicago truncatula
Medtr8g089420 1.0kb upstream 1.0kb upstream 1000   false chr8: 37168852-37169851 Medicago truncatula
Medtr8g089420 1.0kb downstream 1.0kb downstream 2575   true chr8: 37169852-37172426 Medicago truncatula
Medtr8g089420 1.0kb downstream 1.0kb downstream 1000   false chr8: 37171427-37172426 Medicago truncatula
Medtr8g089420 2.0kb upstream 2.0kb upstream 3575   true chr8: 37167852-37171426 Medicago truncatula
Medtr8g089420 2.0kb upstream 2.0kb upstream 2000   false chr8: 37167852-37169851 Medicago truncatula
Medtr8g089420 2.0kb downstream 2.0kb downstream 3575   true chr8: 37169852-37173426 Medicago truncatula
Medtr8g089420 2.0kb downstream 2.0kb downstream 2000   false chr8: 37171427-37173426 Medicago truncatula
Medtr8g089420 5.0kb upstream 5.0kb upstream 6575   true chr8: 37164852-37171426 Medicago truncatula
Medtr8g089420 5.0kb upstream 5.0kb upstream 5000   false chr8: 37164852-37169851 Medicago truncatula
Medtr8g089420 5.0kb downstream 5.0kb downstream 6575   true chr8: 37169852-37176426 Medicago truncatula
Medtr8g089420 5.0kb downstream 5.0kb downstream 5000   false chr8: 37171427-37176426 Medicago truncatula
Medtr8g089420 10.0kb upstream 10.0kb upstream 11575   true chr8: 37159852-37171426 Medicago truncatula
Medtr8g089420 10.0kb upstream 10.0kb upstream 10000   false chr8: 37159852-37169851 Medicago truncatula
Medtr8g089420 10.0kb downstream 10.0kb downstream 11575   true chr8: 37169852-37181426 Medicago truncatula
Medtr8g089420 10.0kb downstream 10.0kb downstream 10000   false chr8: 37171427-37181426 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311643 5265 Fabidae View MSA
124067652 5270 Rosid View MSA
123738624 5271 Pentapetalae View MSA
122769929 5272 Eudicot View MSA
122046233 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121310576 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.014     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.156        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.127        

0 Strain