Gene : Medtr8g089785 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR32091:SF0 - EUKARYOTIC INITIATION FACTOR 4B-RELATED Description:  plant-specific eukaryotic initiation factor 4B
Genomic Order:  4655 Name:  ? Medtr8g089785
Secondary Identifier:  ? PAC:31075897
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g089785 0.5kb upstream 0.5kb upstream 8128   true chr8: 37412273-37420400 Medicago truncatula
Medtr8g089785 0.5kb upstream 0.5kb upstream 500   false chr8: 37419901-37420400 Medicago truncatula
Medtr8g089785 0.5kb downstream 0.5kb downstream 8128   true chr8: 37411773-37419900 Medicago truncatula
Medtr8g089785 0.5kb downstream 0.5kb downstream 500   false chr8: 37411773-37412272 Medicago truncatula
Medtr8g089785 1.0kb upstream 1.0kb upstream 8628   true chr8: 37412273-37420900 Medicago truncatula
Medtr8g089785 1.0kb upstream 1.0kb upstream 1000   false chr8: 37419901-37420900 Medicago truncatula
Medtr8g089785 1.0kb downstream 1.0kb downstream 8628   true chr8: 37411273-37419900 Medicago truncatula
Medtr8g089785 1.0kb downstream 1.0kb downstream 1000   false chr8: 37411273-37412272 Medicago truncatula
Medtr8g089785 2.0kb upstream 2.0kb upstream 9628   true chr8: 37412273-37421900 Medicago truncatula
Medtr8g089785 2.0kb upstream 2.0kb upstream 2000   false chr8: 37419901-37421900 Medicago truncatula
Medtr8g089785 2.0kb downstream 2.0kb downstream 9628   true chr8: 37410273-37419900 Medicago truncatula
Medtr8g089785 2.0kb downstream 2.0kb downstream 2000   false chr8: 37410273-37412272 Medicago truncatula
Medtr8g089785 5.0kb upstream 5.0kb upstream 12628   true chr8: 37412273-37424900 Medicago truncatula
Medtr8g089785 5.0kb upstream 5.0kb upstream 5000   false chr8: 37419901-37424900 Medicago truncatula
Medtr8g089785 5.0kb downstream 5.0kb downstream 12628   true chr8: 37407273-37419900 Medicago truncatula
Medtr8g089785 5.0kb downstream 5.0kb downstream 5000   false chr8: 37407273-37412272 Medicago truncatula
Medtr8g089785 10.0kb upstream 10.0kb upstream 17628   true chr8: 37412273-37429900 Medicago truncatula
Medtr8g089785 10.0kb upstream 10.0kb upstream 10000   false chr8: 37419901-37429900 Medicago truncatula
Medtr8g089785 10.0kb downstream 10.0kb downstream 17628   true chr8: 37402273-37419900 Medicago truncatula
Medtr8g089785 10.0kb downstream 10.0kb downstream 10000   false chr8: 37402273-37412272 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299423 5265 Fabidae View MSA
124064009 5270 Rosid View MSA
123749335 5271 Pentapetalae View MSA
122788320 5272 Eudicot View MSA
122051385 5273 Angiosperm View MSA
121351135 5274 Embryophyte View MSA
123426003 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.742       Low
cufflinks 7.939        
cufflinks 7.169        
cufflinks 10.866     High High
cufflinks 8.524        
cufflinks 3.733       Low
cufflinks 5.871        
cufflinks 6.627        
cufflinks 10.129       High

0 Strain