Gene : Medtr8g090205 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF00612//PF01833//PF03859 - IQ calmodulin-binding motif (IQ) // IPT/TIG domain (TIG) // CG-1 domain (CG-1) Description:  calmodulin-binding transcription activator
Genomic Order:  4712 Name:  ? Medtr8g090205
Secondary Identifier:  ? PAC:31070987
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g090205 0.5kb upstream 0.5kb upstream 7573   true chr8: 37838861-37846433 Medicago truncatula
Medtr8g090205 0.5kb upstream 0.5kb upstream 500   false chr8: 37845934-37846433 Medicago truncatula
Medtr8g090205 0.5kb downstream 0.5kb downstream 7573   true chr8: 37838361-37845933 Medicago truncatula
Medtr8g090205 0.5kb downstream 0.5kb downstream 500   false chr8: 37838361-37838860 Medicago truncatula
Medtr8g090205 1.0kb upstream 1.0kb upstream 8073   true chr8: 37838861-37846933 Medicago truncatula
Medtr8g090205 1.0kb upstream 1.0kb upstream 1000   false chr8: 37845934-37846933 Medicago truncatula
Medtr8g090205 1.0kb downstream 1.0kb downstream 8073   true chr8: 37837861-37845933 Medicago truncatula
Medtr8g090205 1.0kb downstream 1.0kb downstream 1000   false chr8: 37837861-37838860 Medicago truncatula
Medtr8g090205 2.0kb upstream 2.0kb upstream 9073   true chr8: 37838861-37847933 Medicago truncatula
Medtr8g090205 2.0kb upstream 2.0kb upstream 2000   false chr8: 37845934-37847933 Medicago truncatula
Medtr8g090205 2.0kb downstream 2.0kb downstream 9073   true chr8: 37836861-37845933 Medicago truncatula
Medtr8g090205 2.0kb downstream 2.0kb downstream 2000   false chr8: 37836861-37838860 Medicago truncatula
Medtr8g090205 5.0kb upstream 5.0kb upstream 12073   true chr8: 37838861-37850933 Medicago truncatula
Medtr8g090205 5.0kb upstream 5.0kb upstream 5000   false chr8: 37845934-37850933 Medicago truncatula
Medtr8g090205 5.0kb downstream 5.0kb downstream 12073   true chr8: 37833861-37845933 Medicago truncatula
Medtr8g090205 5.0kb downstream 5.0kb downstream 5000   false chr8: 37833861-37838860 Medicago truncatula
Medtr8g090205 10.0kb upstream 10.0kb upstream 17073   true chr8: 37838861-37855933 Medicago truncatula
Medtr8g090205 10.0kb upstream 10.0kb upstream 10000   false chr8: 37845934-37855933 Medicago truncatula
Medtr8g090205 10.0kb downstream 10.0kb downstream 17073   true chr8: 37828861-37845933 Medicago truncatula
Medtr8g090205 10.0kb downstream 10.0kb downstream 10000   false chr8: 37828861-37838860 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310987 5265 Fabidae View MSA
124071259 5270 Rosid View MSA
123742819 5271 Pentapetalae View MSA
122795418 5272 Eudicot View MSA
122048924 5273 Angiosperm View MSA
121350175 5274 Embryophyte View MSA
123427695 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.811       High
cufflinks 0.682        
cufflinks 0.78        
cufflinks 0.075       Low
cufflinks 0.297        
cufflinks 0.557        
cufflinks 1.784        
cufflinks 0.433        
cufflinks 2.4       High

0 Strain