Gene : Medtr8g090190 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR24006:SF469 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4 Description:  ubiquitin carboxyl-terminal hydrolase
Genomic Order:  4709 Name:  ? Medtr8g090190
Secondary Identifier:  ? PAC:31074261
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g090190 0.5kb upstream 0.5kb upstream 6806   true chr8: 37821453-37828258 Medicago truncatula
Medtr8g090190 0.5kb upstream 0.5kb upstream 500   false chr8: 37821453-37821952 Medicago truncatula
Medtr8g090190 0.5kb downstream 0.5kb downstream 6806   true chr8: 37821953-37828758 Medicago truncatula
Medtr8g090190 0.5kb downstream 0.5kb downstream 500   false chr8: 37828259-37828758 Medicago truncatula
Medtr8g090190 1.0kb upstream 1.0kb upstream 7306   true chr8: 37820953-37828258 Medicago truncatula
Medtr8g090190 1.0kb upstream 1.0kb upstream 1000   false chr8: 37820953-37821952 Medicago truncatula
Medtr8g090190 1.0kb downstream 1.0kb downstream 7306   true chr8: 37821953-37829258 Medicago truncatula
Medtr8g090190 1.0kb downstream 1.0kb downstream 1000   false chr8: 37828259-37829258 Medicago truncatula
Medtr8g090190 2.0kb upstream 2.0kb upstream 8306   true chr8: 37819953-37828258 Medicago truncatula
Medtr8g090190 2.0kb upstream 2.0kb upstream 2000   false chr8: 37819953-37821952 Medicago truncatula
Medtr8g090190 2.0kb downstream 2.0kb downstream 8306   true chr8: 37821953-37830258 Medicago truncatula
Medtr8g090190 2.0kb downstream 2.0kb downstream 2000   false chr8: 37828259-37830258 Medicago truncatula
Medtr8g090190 5.0kb upstream 5.0kb upstream 11306   true chr8: 37816953-37828258 Medicago truncatula
Medtr8g090190 5.0kb upstream 5.0kb upstream 5000   false chr8: 37816953-37821952 Medicago truncatula
Medtr8g090190 5.0kb downstream 5.0kb downstream 11306   true chr8: 37821953-37833258 Medicago truncatula
Medtr8g090190 5.0kb downstream 5.0kb downstream 5000   false chr8: 37828259-37833258 Medicago truncatula
Medtr8g090190 10.0kb upstream 10.0kb upstream 16306   true chr8: 37811953-37828258 Medicago truncatula
Medtr8g090190 10.0kb upstream 10.0kb upstream 10000   false chr8: 37811953-37821952 Medicago truncatula
Medtr8g090190 10.0kb downstream 10.0kb downstream 16306   true chr8: 37821953-37838258 Medicago truncatula
Medtr8g090190 10.0kb downstream 10.0kb downstream 10000   false chr8: 37828259-37838258 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306839 5265 Fabidae View MSA
124061352 5270 Rosid View MSA
123749945 5271 Pentapetalae View MSA
122787648 5272 Eudicot View MSA
122047391 5273 Angiosperm View MSA
121345894 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.613       Low
cufflinks 7.783        
cufflinks 7.673        
cufflinks 6.321        
cufflinks 7.452        
cufflinks 4.129       Low
cufflinks 6.476        
cufflinks 6.76        
cufflinks 7.551        

0 Strain