Gene : Medtr8g090180 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR15139 - TUBULIN FOLDING COFACTOR C Description:  tubulin folding cofactor C, putative
Genomic Order:  4707 Name:  ? Medtr8g090180
Secondary Identifier:  ? PAC:31073606
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g090180 0.5kb upstream 0.5kb upstream 1989   true chr8: 37808334-37810322 Medicago truncatula
Medtr8g090180 0.5kb upstream 0.5kb upstream 500   false chr8: 37809823-37810322 Medicago truncatula
Medtr8g090180 0.5kb downstream 0.5kb downstream 1989   true chr8: 37807834-37809822 Medicago truncatula
Medtr8g090180 0.5kb downstream 0.5kb downstream 500   false chr8: 37807834-37808333 Medicago truncatula
Medtr8g090180 1.0kb upstream 1.0kb upstream 2489   true chr8: 37808334-37810822 Medicago truncatula
Medtr8g090180 1.0kb upstream 1.0kb upstream 1000   false chr8: 37809823-37810822 Medicago truncatula
Medtr8g090180 1.0kb downstream 1.0kb downstream 2489   true chr8: 37807334-37809822 Medicago truncatula
Medtr8g090180 1.0kb downstream 1.0kb downstream 1000   false chr8: 37807334-37808333 Medicago truncatula
Medtr8g090180 2.0kb upstream 2.0kb upstream 3489   true chr8: 37808334-37811822 Medicago truncatula
Medtr8g090180 2.0kb upstream 2.0kb upstream 2000   false chr8: 37809823-37811822 Medicago truncatula
Medtr8g090180 2.0kb downstream 2.0kb downstream 3489   true chr8: 37806334-37809822 Medicago truncatula
Medtr8g090180 2.0kb downstream 2.0kb downstream 2000   false chr8: 37806334-37808333 Medicago truncatula
Medtr8g090180 5.0kb upstream 5.0kb upstream 6489   true chr8: 37808334-37814822 Medicago truncatula
Medtr8g090180 5.0kb upstream 5.0kb upstream 5000   false chr8: 37809823-37814822 Medicago truncatula
Medtr8g090180 5.0kb downstream 5.0kb downstream 6489   true chr8: 37803334-37809822 Medicago truncatula
Medtr8g090180 5.0kb downstream 5.0kb downstream 5000   false chr8: 37803334-37808333 Medicago truncatula
Medtr8g090180 10.0kb upstream 10.0kb upstream 11489   true chr8: 37808334-37819822 Medicago truncatula
Medtr8g090180 10.0kb upstream 10.0kb upstream 10000   false chr8: 37809823-37819822 Medicago truncatula
Medtr8g090180 10.0kb downstream 10.0kb downstream 11489   true chr8: 37798334-37809822 Medicago truncatula
Medtr8g090180 10.0kb downstream 10.0kb downstream 10000   false chr8: 37798334-37808333 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306322 5265 Fabidae View MSA
124069115 5270 Rosid View MSA
123737356 5271 Pentapetalae View MSA
122788060 5272 Eudicot View MSA
122045521 5273 Angiosperm View MSA
121344345 5274 Embryophyte View MSA
123426531 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.345       Low
cufflinks 4.15        
cufflinks 4.762        
cufflinks 16.306     High High
cufflinks 5.014        
cufflinks 4.913        
cufflinks 5.185        
cufflinks 3.861        
cufflinks 10.21       High

0 Strain