Gene : Medtr8g089925 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21355:SF0 - LMBR1 DOMAIN-CONTAINING PROTEIN 2 Description:  LMBR1 integral membrane-like protein
Genomic Order:  4673 Name:  ? Medtr8g089925
Secondary Identifier:  ? PAC:31072300
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g089925 0.5kb upstream 0.5kb upstream 9884   true chr8: 37548952-37558835 Medicago truncatula
Medtr8g089925 0.5kb upstream 0.5kb upstream 500   false chr8: 37558336-37558835 Medicago truncatula
Medtr8g089925 0.5kb downstream 0.5kb downstream 9884   true chr8: 37548452-37558335 Medicago truncatula
Medtr8g089925 0.5kb downstream 0.5kb downstream 500   false chr8: 37548452-37548951 Medicago truncatula
Medtr8g089925 1.0kb upstream 1.0kb upstream 10384   true chr8: 37548952-37559335 Medicago truncatula
Medtr8g089925 1.0kb upstream 1.0kb upstream 1000   false chr8: 37558336-37559335 Medicago truncatula
Medtr8g089925 1.0kb downstream 1.0kb downstream 10384   true chr8: 37547952-37558335 Medicago truncatula
Medtr8g089925 1.0kb downstream 1.0kb downstream 1000   false chr8: 37547952-37548951 Medicago truncatula
Medtr8g089925 2.0kb upstream 2.0kb upstream 11384   true chr8: 37548952-37560335 Medicago truncatula
Medtr8g089925 2.0kb upstream 2.0kb upstream 2000   false chr8: 37558336-37560335 Medicago truncatula
Medtr8g089925 2.0kb downstream 2.0kb downstream 11384   true chr8: 37546952-37558335 Medicago truncatula
Medtr8g089925 2.0kb downstream 2.0kb downstream 2000   false chr8: 37546952-37548951 Medicago truncatula
Medtr8g089925 5.0kb upstream 5.0kb upstream 14384   true chr8: 37548952-37563335 Medicago truncatula
Medtr8g089925 5.0kb upstream 5.0kb upstream 5000   false chr8: 37558336-37563335 Medicago truncatula
Medtr8g089925 5.0kb downstream 5.0kb downstream 14384   true chr8: 37543952-37558335 Medicago truncatula
Medtr8g089925 5.0kb downstream 5.0kb downstream 5000   false chr8: 37543952-37548951 Medicago truncatula
Medtr8g089925 10.0kb upstream 10.0kb upstream 19384   true chr8: 37548952-37568335 Medicago truncatula
Medtr8g089925 10.0kb upstream 10.0kb upstream 10000   false chr8: 37558336-37568335 Medicago truncatula
Medtr8g089925 10.0kb downstream 10.0kb downstream 19384   true chr8: 37538952-37558335 Medicago truncatula
Medtr8g089925 10.0kb downstream 10.0kb downstream 10000   false chr8: 37538952-37548951 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309958 5265 Fabidae View MSA
124066630 5270 Rosid View MSA
123751188 5271 Pentapetalae View MSA
122786187 5272 Eudicot View MSA
122043749 5273 Angiosperm View MSA
121346120 5274 Embryophyte View MSA
123425964 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.891        
cufflinks 0.855        
cufflinks 0.971        
cufflinks 0.21       Low
cufflinks 1.037        
cufflinks 0.304       Low
cufflinks 0.572        
cufflinks 0.819        
cufflinks 0.468        

0 Strain