Gene : Medtr8g092200 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG3172 - Small nuclear ribonucleoprotein Sm D3 Description:  small nuclear ribonucleoprotein
Genomic Order:  4805 Name:  ? Medtr8g092200
Secondary Identifier:  ? PAC:31074227
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g092200 0.5kb upstream 0.5kb upstream 2727   true chr8: 38528326-38531052 Medicago truncatula
Medtr8g092200 0.5kb upstream 0.5kb upstream 500   false chr8: 38530553-38531052 Medicago truncatula
Medtr8g092200 0.5kb downstream 0.5kb downstream 2727   true chr8: 38527826-38530552 Medicago truncatula
Medtr8g092200 0.5kb downstream 0.5kb downstream 500   false chr8: 38527826-38528325 Medicago truncatula
Medtr8g092200 1.0kb upstream 1.0kb upstream 3227   true chr8: 38528326-38531552 Medicago truncatula
Medtr8g092200 1.0kb upstream 1.0kb upstream 1000   false chr8: 38530553-38531552 Medicago truncatula
Medtr8g092200 1.0kb downstream 1.0kb downstream 3227   true chr8: 38527326-38530552 Medicago truncatula
Medtr8g092200 1.0kb downstream 1.0kb downstream 1000   false chr8: 38527326-38528325 Medicago truncatula
Medtr8g092200 2.0kb upstream 2.0kb upstream 4227   true chr8: 38528326-38532552 Medicago truncatula
Medtr8g092200 2.0kb upstream 2.0kb upstream 2000   false chr8: 38530553-38532552 Medicago truncatula
Medtr8g092200 2.0kb downstream 2.0kb downstream 4227   true chr8: 38526326-38530552 Medicago truncatula
Medtr8g092200 2.0kb downstream 2.0kb downstream 2000   false chr8: 38526326-38528325 Medicago truncatula
Medtr8g092200 5.0kb upstream 5.0kb upstream 7227   true chr8: 38528326-38535552 Medicago truncatula
Medtr8g092200 5.0kb upstream 5.0kb upstream 5000   false chr8: 38530553-38535552 Medicago truncatula
Medtr8g092200 5.0kb downstream 5.0kb downstream 7227   true chr8: 38523326-38530552 Medicago truncatula
Medtr8g092200 5.0kb downstream 5.0kb downstream 5000   false chr8: 38523326-38528325 Medicago truncatula
Medtr8g092200 10.0kb upstream 10.0kb upstream 12227   true chr8: 38528326-38540552 Medicago truncatula
Medtr8g092200 10.0kb upstream 10.0kb upstream 10000   false chr8: 38530553-38540552 Medicago truncatula
Medtr8g092200 10.0kb downstream 10.0kb downstream 12227   true chr8: 38518326-38530552 Medicago truncatula
Medtr8g092200 10.0kb downstream 10.0kb downstream 10000   false chr8: 38518326-38528325 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309842 5265 Fabidae View MSA
124071262 5270 Rosid View MSA
123746571 5271 Pentapetalae View MSA
122793733 5272 Eudicot View MSA
122047121 5273 Angiosperm View MSA
121348903 5274 Embryophyte View MSA
123424585 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.938        
cufflinks 8.924        
cufflinks 9.174        
cufflinks 28.892     High High
cufflinks 11.632     High  
cufflinks 15.844     High  
cufflinks 9.053        
cufflinks 8.611        
cufflinks 18.264     High  

0 Strain