Gene : Medtr8g079700 M. truncatula Mt4.0v1
Defline:  (1 of 18) PF05701 - Weak chloroplast movement under blue light (WEMBL) Description:  DUF827 family protein
Genomic Order:  4173 Name:  ? Medtr8g079700
Secondary Identifier:  ? PAC:31071815
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g079700 0.5kb upstream 0.5kb upstream 1466   true chr8: 34171183-34172648 Medicago truncatula
Medtr8g079700 0.5kb upstream 0.5kb upstream 500   false chr8: 34172149-34172648 Medicago truncatula
Medtr8g079700 0.5kb downstream 0.5kb downstream 1466   true chr8: 34170683-34172148 Medicago truncatula
Medtr8g079700 0.5kb downstream 0.5kb downstream 500   false chr8: 34170683-34171182 Medicago truncatula
Medtr8g079700 1.0kb upstream 1.0kb upstream 1966   true chr8: 34171183-34173148 Medicago truncatula
Medtr8g079700 1.0kb upstream 1.0kb upstream 1000   false chr8: 34172149-34173148 Medicago truncatula
Medtr8g079700 1.0kb downstream 1.0kb downstream 1966   true chr8: 34170183-34172148 Medicago truncatula
Medtr8g079700 1.0kb downstream 1.0kb downstream 1000   false chr8: 34170183-34171182 Medicago truncatula
Medtr8g079700 2.0kb upstream 2.0kb upstream 2966   true chr8: 34171183-34174148 Medicago truncatula
Medtr8g079700 2.0kb upstream 2.0kb upstream 2000   false chr8: 34172149-34174148 Medicago truncatula
Medtr8g079700 2.0kb downstream 2.0kb downstream 2966   true chr8: 34169183-34172148 Medicago truncatula
Medtr8g079700 2.0kb downstream 2.0kb downstream 2000   false chr8: 34169183-34171182 Medicago truncatula
Medtr8g079700 5.0kb upstream 5.0kb upstream 5966   true chr8: 34171183-34177148 Medicago truncatula
Medtr8g079700 5.0kb upstream 5.0kb upstream 5000   false chr8: 34172149-34177148 Medicago truncatula
Medtr8g079700 5.0kb downstream 5.0kb downstream 5966   true chr8: 34166183-34172148 Medicago truncatula
Medtr8g079700 5.0kb downstream 5.0kb downstream 5000   false chr8: 34166183-34171182 Medicago truncatula
Medtr8g079700 10.0kb upstream 10.0kb upstream 10966   true chr8: 34171183-34182148 Medicago truncatula
Medtr8g079700 10.0kb upstream 10.0kb upstream 10000   false chr8: 34172149-34182148 Medicago truncatula
Medtr8g079700 10.0kb downstream 10.0kb downstream 10966   true chr8: 34161183-34172148 Medicago truncatula
Medtr8g079700 10.0kb downstream 10.0kb downstream 10000   false chr8: 34161183-34171182 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027260 5273 Angiosperm View MSA
122305792 5265 Fabidae View MSA
124050572 5270 Rosid View MSA
123742310 5271 Pentapetalae View MSA
122795621 5272 Eudicot View MSA
121296940 5274 Embryophyte View MSA
123335044 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain