Gene : Medtr8g080790 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR12612 - NUCLEAR TRANSPORT FACTOR 2 Description:  nuclear transport factor 2
Genomic Order:  4248 Name:  ? Medtr8g080790
Secondary Identifier:  ? PAC:31075075
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g080790 0.5kb upstream 0.5kb upstream 3482   true chr8: 34776794-34780275 Medicago truncatula
Medtr8g080790 0.5kb upstream 0.5kb upstream 500   false chr8: 34776794-34777293 Medicago truncatula
Medtr8g080790 0.5kb downstream 0.5kb downstream 3482   true chr8: 34777294-34780775 Medicago truncatula
Medtr8g080790 0.5kb downstream 0.5kb downstream 500   false chr8: 34780276-34780775 Medicago truncatula
Medtr8g080790 1.0kb upstream 1.0kb upstream 3982   true chr8: 34776294-34780275 Medicago truncatula
Medtr8g080790 1.0kb upstream 1.0kb upstream 1000   false chr8: 34776294-34777293 Medicago truncatula
Medtr8g080790 1.0kb downstream 1.0kb downstream 3982   true chr8: 34777294-34781275 Medicago truncatula
Medtr8g080790 1.0kb downstream 1.0kb downstream 1000   false chr8: 34780276-34781275 Medicago truncatula
Medtr8g080790 2.0kb upstream 2.0kb upstream 4982   true chr8: 34775294-34780275 Medicago truncatula
Medtr8g080790 2.0kb upstream 2.0kb upstream 2000   false chr8: 34775294-34777293 Medicago truncatula
Medtr8g080790 2.0kb downstream 2.0kb downstream 4982   true chr8: 34777294-34782275 Medicago truncatula
Medtr8g080790 2.0kb downstream 2.0kb downstream 2000   false chr8: 34780276-34782275 Medicago truncatula
Medtr8g080790 5.0kb upstream 5.0kb upstream 7982   true chr8: 34772294-34780275 Medicago truncatula
Medtr8g080790 5.0kb upstream 5.0kb upstream 5000   false chr8: 34772294-34777293 Medicago truncatula
Medtr8g080790 5.0kb downstream 5.0kb downstream 7982   true chr8: 34777294-34785275 Medicago truncatula
Medtr8g080790 5.0kb downstream 5.0kb downstream 5000   false chr8: 34780276-34785275 Medicago truncatula
Medtr8g080790 10.0kb upstream 10.0kb upstream 12982   true chr8: 34767294-34780275 Medicago truncatula
Medtr8g080790 10.0kb upstream 10.0kb upstream 10000   false chr8: 34767294-34777293 Medicago truncatula
Medtr8g080790 10.0kb downstream 10.0kb downstream 12982   true chr8: 34777294-34790275 Medicago truncatula
Medtr8g080790 10.0kb downstream 10.0kb downstream 10000   false chr8: 34780276-34790275 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309571 5265 Fabidae View MSA
124073712 5270 Rosid View MSA
123736985 5271 Pentapetalae View MSA
122797054 5272 Eudicot View MSA
122051393 5273 Angiosperm View MSA
121351051 5274 Embryophyte View MSA
123427249 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.765       Low
cufflinks 7.607        
cufflinks 9.542        
cufflinks 33.843     High High
cufflinks 8.354        
cufflinks 24.228     High  
cufflinks 15.988     High  
cufflinks 7.721        
cufflinks 29.205     High High

0 Strain