Gene : Medtr8g080700 M. truncatula Mt4.0v1
Defline:  (1 of 6) PF12265 - Histone-binding protein RBBP4 or subunit C of CAF1 complex (CAF1C_H4-bd) Description:  glutamate-rich WD repeat protein
Genomic Order:  4243 Name:  ? Medtr8g080700
Secondary Identifier:  ? PAC:31069944
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g080700 0.5kb upstream 0.5kb upstream 6278   true chr8: 34734055-34740332 Medicago truncatula
Medtr8g080700 0.5kb upstream 0.5kb upstream 500   false chr8: 34739833-34740332 Medicago truncatula
Medtr8g080700 0.5kb downstream 0.5kb downstream 6278   true chr8: 34733555-34739832 Medicago truncatula
Medtr8g080700 0.5kb downstream 0.5kb downstream 500   false chr8: 34733555-34734054 Medicago truncatula
Medtr8g080700 1.0kb upstream 1.0kb upstream 6778   true chr8: 34734055-34740832 Medicago truncatula
Medtr8g080700 1.0kb upstream 1.0kb upstream 1000   false chr8: 34739833-34740832 Medicago truncatula
Medtr8g080700 1.0kb downstream 1.0kb downstream 6778   true chr8: 34733055-34739832 Medicago truncatula
Medtr8g080700 1.0kb downstream 1.0kb downstream 1000   false chr8: 34733055-34734054 Medicago truncatula
Medtr8g080700 2.0kb upstream 2.0kb upstream 7778   true chr8: 34734055-34741832 Medicago truncatula
Medtr8g080700 2.0kb upstream 2.0kb upstream 2000   false chr8: 34739833-34741832 Medicago truncatula
Medtr8g080700 2.0kb downstream 2.0kb downstream 7778   true chr8: 34732055-34739832 Medicago truncatula
Medtr8g080700 2.0kb downstream 2.0kb downstream 2000   false chr8: 34732055-34734054 Medicago truncatula
Medtr8g080700 5.0kb upstream 5.0kb upstream 10778   true chr8: 34734055-34744832 Medicago truncatula
Medtr8g080700 5.0kb upstream 5.0kb upstream 5000   false chr8: 34739833-34744832 Medicago truncatula
Medtr8g080700 5.0kb downstream 5.0kb downstream 10778   true chr8: 34729055-34739832 Medicago truncatula
Medtr8g080700 5.0kb downstream 5.0kb downstream 5000   false chr8: 34729055-34734054 Medicago truncatula
Medtr8g080700 10.0kb upstream 10.0kb upstream 15778   true chr8: 34734055-34749832 Medicago truncatula
Medtr8g080700 10.0kb upstream 10.0kb upstream 10000   false chr8: 34739833-34749832 Medicago truncatula
Medtr8g080700 10.0kb downstream 10.0kb downstream 15778   true chr8: 34724055-34739832 Medicago truncatula
Medtr8g080700 10.0kb downstream 10.0kb downstream 10000   false chr8: 34724055-34734054 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300632 5265 Fabidae View MSA
124069460 5270 Rosid View MSA
123741946 5271 Pentapetalae View MSA
122794414 5272 Eudicot View MSA
122048731 5273 Angiosperm View MSA
121348301 5274 Embryophyte View MSA
123425749 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.968        
cufflinks 4.366        
cufflinks 8.809       High
cufflinks 5.232        
cufflinks 9.694       High
cufflinks 2.205       Low
cufflinks 5.055        
cufflinks 6.642        
cufflinks 6.577        

0 Strain