Gene : Medtr8g080460 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11593 - 60S RIBOSOMAL PROTEIN L17 Description:  60S ribosomal protein L17A
Genomic Order:  4228 Name:  ? Medtr8g080460
Secondary Identifier:  ? PAC:31072930
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g080460 0.5kb upstream 0.5kb upstream 5164   true chr8: 34594132-34599295 Medicago truncatula
Medtr8g080460 0.5kb upstream 0.5kb upstream 500   false chr8: 34598796-34599295 Medicago truncatula
Medtr8g080460 0.5kb downstream 0.5kb downstream 5164   true chr8: 34593632-34598795 Medicago truncatula
Medtr8g080460 0.5kb downstream 0.5kb downstream 500   false chr8: 34593632-34594131 Medicago truncatula
Medtr8g080460 1.0kb upstream 1.0kb upstream 5664   true chr8: 34594132-34599795 Medicago truncatula
Medtr8g080460 1.0kb upstream 1.0kb upstream 1000   false chr8: 34598796-34599795 Medicago truncatula
Medtr8g080460 1.0kb downstream 1.0kb downstream 5664   true chr8: 34593132-34598795 Medicago truncatula
Medtr8g080460 1.0kb downstream 1.0kb downstream 1000   false chr8: 34593132-34594131 Medicago truncatula
Medtr8g080460 2.0kb upstream 2.0kb upstream 6664   true chr8: 34594132-34600795 Medicago truncatula
Medtr8g080460 2.0kb upstream 2.0kb upstream 2000   false chr8: 34598796-34600795 Medicago truncatula
Medtr8g080460 2.0kb downstream 2.0kb downstream 6664   true chr8: 34592132-34598795 Medicago truncatula
Medtr8g080460 2.0kb downstream 2.0kb downstream 2000   false chr8: 34592132-34594131 Medicago truncatula
Medtr8g080460 5.0kb upstream 5.0kb upstream 9664   true chr8: 34594132-34603795 Medicago truncatula
Medtr8g080460 5.0kb upstream 5.0kb upstream 5000   false chr8: 34598796-34603795 Medicago truncatula
Medtr8g080460 5.0kb downstream 5.0kb downstream 9664   true chr8: 34589132-34598795 Medicago truncatula
Medtr8g080460 5.0kb downstream 5.0kb downstream 5000   false chr8: 34589132-34594131 Medicago truncatula
Medtr8g080460 10.0kb upstream 10.0kb upstream 14664   true chr8: 34594132-34608795 Medicago truncatula
Medtr8g080460 10.0kb upstream 10.0kb upstream 10000   false chr8: 34598796-34608795 Medicago truncatula
Medtr8g080460 10.0kb downstream 10.0kb downstream 14664   true chr8: 34584132-34598795 Medicago truncatula
Medtr8g080460 10.0kb downstream 10.0kb downstream 10000   false chr8: 34584132-34594131 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122294772 5265 Fabidae View MSA
124061649 5270 Rosid View MSA
123752995 5271 Pentapetalae View MSA
122790046 5272 Eudicot View MSA
122051496 5273 Angiosperm View MSA
121350050 5274 Embryophyte View MSA
123424396 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.01     High Low
cufflinks 17.976     High Low
cufflinks 18.832     High  
cufflinks 50.279     High High
cufflinks 31.283     High  
cufflinks 29.699     High  
cufflinks 30.843     High  
cufflinks 24.857     High  
cufflinks 44.608     High High

0 Strain