Gene : Medtr8g085570 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG3046 - Transcription factor, subunit of SRB subcomplex of RNA polymerase II Description:  mediator of RNA polymerase II transcription subunit 10
Genomic Order:  4353 Name:  ? Medtr8g085570
Secondary Identifier:  ? PAC:31075875
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g085570 0.5kb upstream 0.5kb upstream 5905   true chr8: 35440421-35446325 Medicago truncatula
Medtr8g085570 0.5kb upstream 0.5kb upstream 500   false chr8: 35445826-35446325 Medicago truncatula
Medtr8g085570 0.5kb downstream 0.5kb downstream 5905   true chr8: 35439921-35445825 Medicago truncatula
Medtr8g085570 0.5kb downstream 0.5kb downstream 500   false chr8: 35439921-35440420 Medicago truncatula
Medtr8g085570 1.0kb upstream 1.0kb upstream 6405   true chr8: 35440421-35446825 Medicago truncatula
Medtr8g085570 1.0kb upstream 1.0kb upstream 1000   false chr8: 35445826-35446825 Medicago truncatula
Medtr8g085570 1.0kb downstream 1.0kb downstream 6405   true chr8: 35439421-35445825 Medicago truncatula
Medtr8g085570 1.0kb downstream 1.0kb downstream 1000   false chr8: 35439421-35440420 Medicago truncatula
Medtr8g085570 2.0kb upstream 2.0kb upstream 7405   true chr8: 35440421-35447825 Medicago truncatula
Medtr8g085570 2.0kb upstream 2.0kb upstream 2000   false chr8: 35445826-35447825 Medicago truncatula
Medtr8g085570 2.0kb downstream 2.0kb downstream 7405   true chr8: 35438421-35445825 Medicago truncatula
Medtr8g085570 2.0kb downstream 2.0kb downstream 2000   false chr8: 35438421-35440420 Medicago truncatula
Medtr8g085570 5.0kb upstream 5.0kb upstream 10405   true chr8: 35440421-35450825 Medicago truncatula
Medtr8g085570 5.0kb upstream 5.0kb upstream 5000   false chr8: 35445826-35450825 Medicago truncatula
Medtr8g085570 5.0kb downstream 5.0kb downstream 10405   true chr8: 35435421-35445825 Medicago truncatula
Medtr8g085570 5.0kb downstream 5.0kb downstream 5000   false chr8: 35435421-35440420 Medicago truncatula
Medtr8g085570 10.0kb upstream 10.0kb upstream 15405   true chr8: 35440421-35455825 Medicago truncatula
Medtr8g085570 10.0kb upstream 10.0kb upstream 10000   false chr8: 35445826-35455825 Medicago truncatula
Medtr8g085570 10.0kb downstream 10.0kb downstream 15405   true chr8: 35430421-35445825 Medicago truncatula
Medtr8g085570 10.0kb downstream 10.0kb downstream 10000   false chr8: 35430421-35440420 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301301 5265 Fabidae View MSA
124062321 5270 Rosid View MSA
123743947 5271 Pentapetalae View MSA
122790703 5272 Eudicot View MSA
122043326 5273 Angiosperm View MSA
121345853 5274 Embryophyte View MSA
123425675 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.41        
cufflinks 0.841        
cufflinks 0.981       High
cufflinks 0.714        
cufflinks 0.755        
cufflinks 0.267       Low
cufflinks 0.558        
cufflinks 0.833        
cufflinks 0.539        

0 Strain