Gene : Medtr8g085780 M. truncatula Mt4.0v1
Description:  calcium ion-binding protein Genomic Order:  4370
Name:  ? Medtr8g085780 Secondary Identifier:  ? PAC:31074741
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g085780 0.5kb upstream 0.5kb upstream 2722   true chr8: 35557868-35560589 Medicago truncatula
Medtr8g085780 0.5kb upstream 0.5kb upstream 500   false chr8: 35560090-35560589 Medicago truncatula
Medtr8g085780 0.5kb downstream 0.5kb downstream 2722   true chr8: 35557368-35560089 Medicago truncatula
Medtr8g085780 0.5kb downstream 0.5kb downstream 500   false chr8: 35557368-35557867 Medicago truncatula
Medtr8g085780 1.0kb upstream 1.0kb upstream 3222   true chr8: 35557868-35561089 Medicago truncatula
Medtr8g085780 1.0kb upstream 1.0kb upstream 1000   false chr8: 35560090-35561089 Medicago truncatula
Medtr8g085780 1.0kb downstream 1.0kb downstream 3222   true chr8: 35556868-35560089 Medicago truncatula
Medtr8g085780 1.0kb downstream 1.0kb downstream 1000   false chr8: 35556868-35557867 Medicago truncatula
Medtr8g085780 2.0kb upstream 2.0kb upstream 4222   true chr8: 35557868-35562089 Medicago truncatula
Medtr8g085780 2.0kb upstream 2.0kb upstream 2000   false chr8: 35560090-35562089 Medicago truncatula
Medtr8g085780 2.0kb downstream 2.0kb downstream 4222   true chr8: 35555868-35560089 Medicago truncatula
Medtr8g085780 2.0kb downstream 2.0kb downstream 2000   false chr8: 35555868-35557867 Medicago truncatula
Medtr8g085780 5.0kb upstream 5.0kb upstream 7222   true chr8: 35557868-35565089 Medicago truncatula
Medtr8g085780 5.0kb upstream 5.0kb upstream 5000   false chr8: 35560090-35565089 Medicago truncatula
Medtr8g085780 5.0kb downstream 5.0kb downstream 7222   true chr8: 35552868-35560089 Medicago truncatula
Medtr8g085780 5.0kb downstream 5.0kb downstream 5000   false chr8: 35552868-35557867 Medicago truncatula
Medtr8g085780 10.0kb upstream 10.0kb upstream 12222   true chr8: 35557868-35570089 Medicago truncatula
Medtr8g085780 10.0kb upstream 10.0kb upstream 10000   false chr8: 35560090-35570089 Medicago truncatula
Medtr8g085780 10.0kb downstream 10.0kb downstream 12222   true chr8: 35547868-35560089 Medicago truncatula
Medtr8g085780 10.0kb downstream 10.0kb downstream 10000   false chr8: 35547868-35557867 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041169 5273 Angiosperm View MSA
122302638 5265 Fabidae View MSA
124062588 5270 Rosid View MSA
123745625 5271 Pentapetalae View MSA
122788144 5272 Eudicot View MSA
121348418 5274 Embryophyte View MSA
123380857 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.764        
cufflinks 11.249     High  
cufflinks 8.833        
cufflinks 4.15        
cufflinks 17.435     High High
cufflinks 1.079       Low
cufflinks 3.285        
cufflinks 7.875        
cufflinks 6.851        

0 Strain