Gene : Medtr8g086300 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR12902 - WASP-1 Description:  SCAR3
Genomic Order:  4403 Name:  ? Medtr8g086300
Secondary Identifier:  ? PAC:31076015
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g086300 0.5kb upstream 0.5kb upstream 8141   true chr8: 35782825-35790965 Medicago truncatula
Medtr8g086300 0.5kb upstream 0.5kb upstream 500   false chr8: 35790466-35790965 Medicago truncatula
Medtr8g086300 0.5kb downstream 0.5kb downstream 8141   true chr8: 35782325-35790465 Medicago truncatula
Medtr8g086300 0.5kb downstream 0.5kb downstream 500   false chr8: 35782325-35782824 Medicago truncatula
Medtr8g086300 1.0kb upstream 1.0kb upstream 8641   true chr8: 35782825-35791465 Medicago truncatula
Medtr8g086300 1.0kb upstream 1.0kb upstream 1000   false chr8: 35790466-35791465 Medicago truncatula
Medtr8g086300 1.0kb downstream 1.0kb downstream 8641   true chr8: 35781825-35790465 Medicago truncatula
Medtr8g086300 1.0kb downstream 1.0kb downstream 1000   false chr8: 35781825-35782824 Medicago truncatula
Medtr8g086300 2.0kb upstream 2.0kb upstream 9641   true chr8: 35782825-35792465 Medicago truncatula
Medtr8g086300 2.0kb upstream 2.0kb upstream 2000   false chr8: 35790466-35792465 Medicago truncatula
Medtr8g086300 2.0kb downstream 2.0kb downstream 9641   true chr8: 35780825-35790465 Medicago truncatula
Medtr8g086300 2.0kb downstream 2.0kb downstream 2000   false chr8: 35780825-35782824 Medicago truncatula
Medtr8g086300 5.0kb upstream 5.0kb upstream 12641   true chr8: 35782825-35795465 Medicago truncatula
Medtr8g086300 5.0kb upstream 5.0kb upstream 5000   false chr8: 35790466-35795465 Medicago truncatula
Medtr8g086300 5.0kb downstream 5.0kb downstream 12641   true chr8: 35777825-35790465 Medicago truncatula
Medtr8g086300 5.0kb downstream 5.0kb downstream 5000   false chr8: 35777825-35782824 Medicago truncatula
Medtr8g086300 10.0kb upstream 10.0kb upstream 17641   true chr8: 35782825-35800465 Medicago truncatula
Medtr8g086300 10.0kb upstream 10.0kb upstream 10000   false chr8: 35790466-35800465 Medicago truncatula
Medtr8g086300 10.0kb downstream 10.0kb downstream 17641   true chr8: 35772825-35790465 Medicago truncatula
Medtr8g086300 10.0kb downstream 10.0kb downstream 10000   false chr8: 35772825-35782824 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313768 5265 Fabidae View MSA
124060592 5270 Rosid View MSA
123744362 5271 Pentapetalae View MSA
122797754 5272 Eudicot View MSA
122043443 5273 Angiosperm View MSA
121351143 5274 Embryophyte View MSA
123382024 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.411        
cufflinks 9.444        
cufflinks 10.715     High High
cufflinks 1.417       Low
cufflinks 9.595        
cufflinks 0.983       Low
cufflinks 2.132        
cufflinks 9.979     High High
cufflinks 2.221        

0 Strain