Gene : Medtr8g086290 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR11945//PTHR11945:SF164 - MADS BOX PROTEIN Description:  MADS-box transcription factor family protein
Genomic Order:  4402 Name:  ? Medtr8g086290
Secondary Identifier:  ? PAC:31075345
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g086290 0.5kb upstream 0.5kb upstream 1034   true chr8: 35781430-35782463 Medicago truncatula
Medtr8g086290 0.5kb upstream 0.5kb upstream 500   false chr8: 35781430-35781929 Medicago truncatula
Medtr8g086290 0.5kb downstream 0.5kb downstream 1034   true chr8: 35781930-35782963 Medicago truncatula
Medtr8g086290 0.5kb downstream 0.5kb downstream 500   false chr8: 35782464-35782963 Medicago truncatula
Medtr8g086290 1.0kb upstream 1.0kb upstream 1534   true chr8: 35780930-35782463 Medicago truncatula
Medtr8g086290 1.0kb upstream 1.0kb upstream 1000   false chr8: 35780930-35781929 Medicago truncatula
Medtr8g086290 1.0kb downstream 1.0kb downstream 1534   true chr8: 35781930-35783463 Medicago truncatula
Medtr8g086290 1.0kb downstream 1.0kb downstream 1000   false chr8: 35782464-35783463 Medicago truncatula
Medtr8g086290 2.0kb upstream 2.0kb upstream 2534   true chr8: 35779930-35782463 Medicago truncatula
Medtr8g086290 2.0kb upstream 2.0kb upstream 2000   false chr8: 35779930-35781929 Medicago truncatula
Medtr8g086290 2.0kb downstream 2.0kb downstream 2534   true chr8: 35781930-35784463 Medicago truncatula
Medtr8g086290 2.0kb downstream 2.0kb downstream 2000   false chr8: 35782464-35784463 Medicago truncatula
Medtr8g086290 5.0kb upstream 5.0kb upstream 5534   true chr8: 35776930-35782463 Medicago truncatula
Medtr8g086290 5.0kb upstream 5.0kb upstream 5000   false chr8: 35776930-35781929 Medicago truncatula
Medtr8g086290 5.0kb downstream 5.0kb downstream 5534   true chr8: 35781930-35787463 Medicago truncatula
Medtr8g086290 5.0kb downstream 5.0kb downstream 5000   false chr8: 35782464-35787463 Medicago truncatula
Medtr8g086290 10.0kb upstream 10.0kb upstream 10534   true chr8: 35771930-35782463 Medicago truncatula
Medtr8g086290 10.0kb upstream 10.0kb upstream 10000   false chr8: 35771930-35781929 Medicago truncatula
Medtr8g086290 10.0kb downstream 10.0kb downstream 10534   true chr8: 35781930-35792463 Medicago truncatula
Medtr8g086290 10.0kb downstream 10.0kb downstream 10000   false chr8: 35782464-35792463 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311915 5265 Fabidae View MSA
124073225 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low Low
cufflinks 0.028     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.047     Low  
cufflinks 0.114     Low High
cufflinks 0.05     Low  
cufflinks 0.071        
cufflinks 0.056     Low  

0 Strain