Gene : Medtr0024s0220 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11449 - RIBOSOMAL PROTEIN L30 Description:  ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
Genomic Order:  19 Name:  ? Medtr0024s0220
Secondary Identifier:  ? PAC:31061877
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0024s0220 0.5kb upstream 0.5kb upstream 3966   true scaffold0024: 95931-99896 Medicago truncatula
Medtr0024s0220 0.5kb upstream 0.5kb upstream 500   false scaffold0024: 95931-96430 Medicago truncatula
Medtr0024s0220 0.5kb downstream 0.5kb downstream 3966   true scaffold0024: 96431-100396 Medicago truncatula
Medtr0024s0220 0.5kb downstream 0.5kb downstream 500   false scaffold0024: 99897-100396 Medicago truncatula
Medtr0024s0220 1.0kb upstream 1.0kb upstream 4466   true scaffold0024: 95431-99896 Medicago truncatula
Medtr0024s0220 1.0kb upstream 1.0kb upstream 1000   false scaffold0024: 95431-96430 Medicago truncatula
Medtr0024s0220 1.0kb downstream 1.0kb downstream 4466   true scaffold0024: 96431-100896 Medicago truncatula
Medtr0024s0220 1.0kb downstream 1.0kb downstream 1000   false scaffold0024: 99897-100896 Medicago truncatula
Medtr0024s0220 2.0kb upstream 2.0kb upstream 5466   true scaffold0024: 94431-99896 Medicago truncatula
Medtr0024s0220 2.0kb upstream 2.0kb upstream 2000   false scaffold0024: 94431-96430 Medicago truncatula
Medtr0024s0220 2.0kb downstream 2.0kb downstream 5466   true scaffold0024: 96431-101896 Medicago truncatula
Medtr0024s0220 2.0kb downstream 2.0kb downstream 2000   false scaffold0024: 99897-101896 Medicago truncatula
Medtr0024s0220 5.0kb upstream 5.0kb upstream 8466   true scaffold0024: 91431-99896 Medicago truncatula
Medtr0024s0220 5.0kb upstream 5.0kb upstream 5000   false scaffold0024: 91431-96430 Medicago truncatula
Medtr0024s0220 5.0kb downstream 5.0kb downstream 8466   true scaffold0024: 96431-104896 Medicago truncatula
Medtr0024s0220 5.0kb downstream 5.0kb downstream 5000   false scaffold0024: 99897-104896 Medicago truncatula
Medtr0024s0220 10.0kb upstream 10.0kb upstream 13466   true scaffold0024: 86431-99896 Medicago truncatula
Medtr0024s0220 10.0kb upstream 10.0kb upstream 10000   false scaffold0024: 86431-96430 Medicago truncatula
Medtr0024s0220 10.0kb downstream 10.0kb downstream 13466   true scaffold0024: 96431-109896 Medicago truncatula
Medtr0024s0220 10.0kb downstream 10.0kb downstream 10000   false scaffold0024: 99897-109896 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314746 5265 Fabidae View MSA
124064182 5270 Rosid View MSA
123750614 5271 Pentapetalae View MSA
122788206 5272 Eudicot View MSA
122051684 5273 Angiosperm View MSA
121344063 5274 Embryophyte View MSA
123425041 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.601       Low
cufflinks 8.331        
cufflinks 8.247        
cufflinks 24.897     High High
cufflinks 12.989     High  
cufflinks 30.599     High High
cufflinks 18.153     High  
cufflinks 9.614     High  
cufflinks 23.643     High  

0 Strain