Gene : Medtr0025s0060 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10795:SF351 - OF FOUR ADJACENT PUTATIVE SUBTILASE FAMILY-RELATED Description:  tripeptidyl peptidase II
Genomic Order:  3 Name:  ? Medtr0025s0060
Secondary Identifier:  ? PAC:31092308
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0025s0060 0.5kb upstream 0.5kb upstream 33975   true scaffold0025: 22637-56611 Medicago truncatula
Medtr0025s0060 0.5kb upstream 0.5kb upstream 500   false scaffold0025: 22637-23136 Medicago truncatula
Medtr0025s0060 0.5kb downstream 0.5kb downstream 33975   true scaffold0025: 23137-57111 Medicago truncatula
Medtr0025s0060 0.5kb downstream 0.5kb downstream 500   false scaffold0025: 56612-57111 Medicago truncatula
Medtr0025s0060 1.0kb upstream 1.0kb upstream 34475   true scaffold0025: 22137-56611 Medicago truncatula
Medtr0025s0060 1.0kb upstream 1.0kb upstream 1000   false scaffold0025: 22137-23136 Medicago truncatula
Medtr0025s0060 1.0kb downstream 1.0kb downstream 34475   true scaffold0025: 23137-57611 Medicago truncatula
Medtr0025s0060 1.0kb downstream 1.0kb downstream 1000   false scaffold0025: 56612-57611 Medicago truncatula
Medtr0025s0060 2.0kb upstream 2.0kb upstream 35475   true scaffold0025: 21137-56611 Medicago truncatula
Medtr0025s0060 2.0kb upstream 2.0kb upstream 2000   false scaffold0025: 21137-23136 Medicago truncatula
Medtr0025s0060 2.0kb downstream 2.0kb downstream 35475   true scaffold0025: 23137-58611 Medicago truncatula
Medtr0025s0060 2.0kb downstream 2.0kb downstream 2000   false scaffold0025: 56612-58611 Medicago truncatula
Medtr0025s0060 5.0kb upstream 5.0kb upstream 38475   true scaffold0025: 18137-56611 Medicago truncatula
Medtr0025s0060 5.0kb upstream 5.0kb upstream 5000   false scaffold0025: 18137-23136 Medicago truncatula
Medtr0025s0060 5.0kb downstream 5.0kb downstream 38475   true scaffold0025: 23137-61611 Medicago truncatula
Medtr0025s0060 5.0kb downstream 5.0kb downstream 5000   false scaffold0025: 56612-61611 Medicago truncatula
Medtr0025s0060 10.0kb upstream 10.0kb upstream 43475   true scaffold0025: 13137-56611 Medicago truncatula
Medtr0025s0060 10.0kb upstream 10.0kb upstream 10000   false scaffold0025: 13137-23136 Medicago truncatula
Medtr0025s0060 10.0kb downstream 10.0kb downstream 43475   true scaffold0025: 23137-66611 Medicago truncatula
Medtr0025s0060 10.0kb downstream 10.0kb downstream 10000   false scaffold0025: 56612-66611 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311549 5265 Fabidae View MSA
124060927 5270 Rosid View MSA
123739019 5271 Pentapetalae View MSA
122789834 5272 Eudicot View MSA
122045900 5273 Angiosperm View MSA
121344664 5274 Embryophyte View MSA
123424480 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.577       High
cufflinks 1.325        
cufflinks 1.419        
cufflinks 0.929       Low
cufflinks 1.192        
cufflinks 0.9       Low
cufflinks 2.418       High
cufflinks 1.014        
cufflinks 2.047        

0 Strain