Gene : Medtr0042s0030 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  1
Name:  ? Medtr0042s0030 Secondary Identifier:  ? PAC:31101162
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0042s0030 0.5kb upstream 0.5kb upstream 2174   true scaffold0042: 7507-9680 Medicago truncatula
Medtr0042s0030 0.5kb upstream 0.5kb upstream 500   false scaffold0042: 7507-8006 Medicago truncatula
Medtr0042s0030 0.5kb downstream 0.5kb downstream 2174   true scaffold0042: 8007-10180 Medicago truncatula
Medtr0042s0030 0.5kb downstream 0.5kb downstream 500   false scaffold0042: 9681-10180 Medicago truncatula
Medtr0042s0030 1.0kb upstream 1.0kb upstream 2674   true scaffold0042: 7007-9680 Medicago truncatula
Medtr0042s0030 1.0kb upstream 1.0kb upstream 1000   false scaffold0042: 7007-8006 Medicago truncatula
Medtr0042s0030 1.0kb downstream 1.0kb downstream 2674   true scaffold0042: 8007-10680 Medicago truncatula
Medtr0042s0030 1.0kb downstream 1.0kb downstream 1000   false scaffold0042: 9681-10680 Medicago truncatula
Medtr0042s0030 2.0kb upstream 2.0kb upstream 3674   true scaffold0042: 6007-9680 Medicago truncatula
Medtr0042s0030 2.0kb upstream 2.0kb upstream 2000   false scaffold0042: 6007-8006 Medicago truncatula
Medtr0042s0030 2.0kb downstream 2.0kb downstream 3674   true scaffold0042: 8007-11680 Medicago truncatula
Medtr0042s0030 2.0kb downstream 2.0kb downstream 2000   false scaffold0042: 9681-11680 Medicago truncatula
Medtr0042s0030 5.0kb upstream 5.0kb upstream 6674   true scaffold0042: 3007-9680 Medicago truncatula
Medtr0042s0030 5.0kb upstream 5.0kb upstream 5000   false scaffold0042: 3007-8006 Medicago truncatula
Medtr0042s0030 5.0kb downstream 5.0kb downstream 6674   true scaffold0042: 8007-14680 Medicago truncatula
Medtr0042s0030 5.0kb downstream 5.0kb downstream 5000   false scaffold0042: 9681-14680 Medicago truncatula
Medtr0042s0030 10.0kb upstream 10.0kb upstream 9680   true scaffold0042: 1-9680 Medicago truncatula
Medtr0042s0030 10.0kb upstream 10.0kb upstream 8006   false scaffold0042: 1-8006 Medicago truncatula
Medtr0042s0030 10.0kb downstream 10.0kb downstream 11674   true scaffold0042: 8007-19680 Medicago truncatula
Medtr0042s0030 10.0kb downstream 10.0kb downstream 10000   false scaffold0042: 9681-19680 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121631668 5273 Angiosperm Singleton cluster - no MSA
122270290 5265 Fabidae Singleton cluster - no MSA
124011008 5270 Rosid Singleton cluster - no MSA
123584922 5271 Pentapetalae Singleton cluster - no MSA
122619621 5272 Eudicot Singleton cluster - no MSA
120903772 5274 Embryophyte Singleton cluster - no MSA
122944427 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain