Gene : Medtr0041s0030 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR11706:SF49 - ETHYLENE-INSENSITIVE PROTEIN 2 Description:  EIN2-like protein, nramp transporter
Genomic Order:  1 Name:  ? Medtr0041s0030
Secondary Identifier:  ? PAC:31076710
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0041s0030 0.5kb upstream 0.5kb upstream 8472   true scaffold0041: 13160-21631 Medicago truncatula
Medtr0041s0030 0.5kb upstream 0.5kb upstream 500   false scaffold0041: 13160-13659 Medicago truncatula
Medtr0041s0030 0.5kb downstream 0.5kb downstream 8472   true scaffold0041: 13660-22131 Medicago truncatula
Medtr0041s0030 0.5kb downstream 0.5kb downstream 500   false scaffold0041: 21632-22131 Medicago truncatula
Medtr0041s0030 1.0kb upstream 1.0kb upstream 8972   true scaffold0041: 12660-21631 Medicago truncatula
Medtr0041s0030 1.0kb upstream 1.0kb upstream 1000   false scaffold0041: 12660-13659 Medicago truncatula
Medtr0041s0030 1.0kb downstream 1.0kb downstream 8972   true scaffold0041: 13660-22631 Medicago truncatula
Medtr0041s0030 1.0kb downstream 1.0kb downstream 1000   false scaffold0041: 21632-22631 Medicago truncatula
Medtr0041s0030 2.0kb upstream 2.0kb upstream 9972   true scaffold0041: 11660-21631 Medicago truncatula
Medtr0041s0030 2.0kb upstream 2.0kb upstream 2000   false scaffold0041: 11660-13659 Medicago truncatula
Medtr0041s0030 2.0kb downstream 2.0kb downstream 9972   true scaffold0041: 13660-23631 Medicago truncatula
Medtr0041s0030 2.0kb downstream 2.0kb downstream 2000   false scaffold0041: 21632-23631 Medicago truncatula
Medtr0041s0030 5.0kb upstream 5.0kb upstream 12972   true scaffold0041: 8660-21631 Medicago truncatula
Medtr0041s0030 5.0kb upstream 5.0kb upstream 5000   false scaffold0041: 8660-13659 Medicago truncatula
Medtr0041s0030 5.0kb downstream 5.0kb downstream 12972   true scaffold0041: 13660-26631 Medicago truncatula
Medtr0041s0030 5.0kb downstream 5.0kb downstream 5000   false scaffold0041: 21632-26631 Medicago truncatula
Medtr0041s0030 10.0kb upstream 10.0kb upstream 17972   true scaffold0041: 3660-21631 Medicago truncatula
Medtr0041s0030 10.0kb upstream 10.0kb upstream 10000   false scaffold0041: 3660-13659 Medicago truncatula
Medtr0041s0030 10.0kb downstream 10.0kb downstream 17972   true scaffold0041: 13660-31631 Medicago truncatula
Medtr0041s0030 10.0kb downstream 10.0kb downstream 10000   false scaffold0041: 21632-31631 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311933 5265 Fabidae View MSA
124061364 5270 Rosid View MSA
123751165 5271 Pentapetalae View MSA
122789029 5272 Eudicot View MSA
122045136 5273 Angiosperm View MSA
121351109 5274 Embryophyte View MSA
123425586 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.213        
cufflinks 5.802        
cufflinks 6.538        
cufflinks 2.789       Low
cufflinks 6.977       High
cufflinks 1.821       Low
cufflinks 4.305        
cufflinks 4.962        
cufflinks 4.043        

0 Strain