Gene : Medtr0057s0080 M. truncatula Mt4.0v1
Defline:  (1 of 3) 2.3.2.5 - Glutaminyl-peptide cyclotransferase / Glutaminyl-tRNA cyclotransferase Description:  glutamine cyclotransferase
Genomic Order:  3 Name:  ? Medtr0057s0080
Secondary Identifier:  ? PAC:31101102
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0057s0080 0.5kb upstream 0.5kb upstream 11306   true scaffold0057: 23016-34321 Medicago truncatula
Medtr0057s0080 0.5kb upstream 0.5kb upstream 500   false scaffold0057: 23016-23515 Medicago truncatula
Medtr0057s0080 0.5kb downstream 0.5kb downstream 11306   true scaffold0057: 23516-34821 Medicago truncatula
Medtr0057s0080 0.5kb downstream 0.5kb downstream 500   false scaffold0057: 34322-34821 Medicago truncatula
Medtr0057s0080 1.0kb upstream 1.0kb upstream 11806   true scaffold0057: 22516-34321 Medicago truncatula
Medtr0057s0080 1.0kb upstream 1.0kb upstream 1000   false scaffold0057: 22516-23515 Medicago truncatula
Medtr0057s0080 1.0kb downstream 1.0kb downstream 11806   true scaffold0057: 23516-35321 Medicago truncatula
Medtr0057s0080 1.0kb downstream 1.0kb downstream 1000   false scaffold0057: 34322-35321 Medicago truncatula
Medtr0057s0080 2.0kb upstream 2.0kb upstream 12806   true scaffold0057: 21516-34321 Medicago truncatula
Medtr0057s0080 2.0kb upstream 2.0kb upstream 2000   false scaffold0057: 21516-23515 Medicago truncatula
Medtr0057s0080 2.0kb downstream 2.0kb downstream 12806   true scaffold0057: 23516-36321 Medicago truncatula
Medtr0057s0080 2.0kb downstream 2.0kb downstream 2000   false scaffold0057: 34322-36321 Medicago truncatula
Medtr0057s0080 5.0kb upstream 5.0kb upstream 15806   true scaffold0057: 18516-34321 Medicago truncatula
Medtr0057s0080 5.0kb upstream 5.0kb upstream 5000   false scaffold0057: 18516-23515 Medicago truncatula
Medtr0057s0080 5.0kb downstream 5.0kb downstream 15806   true scaffold0057: 23516-39321 Medicago truncatula
Medtr0057s0080 5.0kb downstream 5.0kb downstream 5000   false scaffold0057: 34322-39321 Medicago truncatula
Medtr0057s0080 10.0kb upstream 10.0kb upstream 20806   true scaffold0057: 13516-34321 Medicago truncatula
Medtr0057s0080 10.0kb upstream 10.0kb upstream 10000   false scaffold0057: 13516-23515 Medicago truncatula
Medtr0057s0080 10.0kb downstream 10.0kb downstream 20806   true scaffold0057: 23516-44321 Medicago truncatula
Medtr0057s0080 10.0kb downstream 10.0kb downstream 10000   false scaffold0057: 34322-44321 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300209 5265 Fabidae View MSA
124065871 5270 Rosid View MSA
123747738 5271 Pentapetalae View MSA
122791260 5272 Eudicot View MSA
122047891 5273 Angiosperm View MSA
121348416 5274 Embryophyte View MSA
123426276 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.838        
cufflinks 1.872        
cufflinks 1.446        
cufflinks 1.369        
cufflinks 1.59        
cufflinks 1.293       Low
cufflinks 2.279       High
cufflinks 1.339        
cufflinks 2.238       High

0 Strain