Gene : Medtr0103s0090 M. truncatula Mt4.0v1
Defline:  (1 of 88) PF00892 - EamA-like transporter family (EamA) Description:  nodulin MtN21/EamA-like transporter family protein
Genomic Order:  3 Name:  ? Medtr0103s0090
Secondary Identifier:  ? PAC:31076656
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0103s0090 0.5kb upstream 0.5kb upstream 5715   true scaffold0103: 41788-47502 Medicago truncatula
Medtr0103s0090 0.5kb upstream 0.5kb upstream 500   false scaffold0103: 41788-42287 Medicago truncatula
Medtr0103s0090 0.5kb downstream 0.5kb downstream 5715   true scaffold0103: 42288-48002 Medicago truncatula
Medtr0103s0090 0.5kb downstream 0.5kb downstream 500   false scaffold0103: 47503-48002 Medicago truncatula
Medtr0103s0090 1.0kb upstream 1.0kb upstream 6215   true scaffold0103: 41288-47502 Medicago truncatula
Medtr0103s0090 1.0kb upstream 1.0kb upstream 1000   false scaffold0103: 41288-42287 Medicago truncatula
Medtr0103s0090 1.0kb downstream 1.0kb downstream 6215   true scaffold0103: 42288-48502 Medicago truncatula
Medtr0103s0090 1.0kb downstream 1.0kb downstream 1000   false scaffold0103: 47503-48502 Medicago truncatula
Medtr0103s0090 2.0kb upstream 2.0kb upstream 7215   true scaffold0103: 40288-47502 Medicago truncatula
Medtr0103s0090 2.0kb upstream 2.0kb upstream 2000   false scaffold0103: 40288-42287 Medicago truncatula
Medtr0103s0090 2.0kb downstream 2.0kb downstream 7215   true scaffold0103: 42288-49502 Medicago truncatula
Medtr0103s0090 2.0kb downstream 2.0kb downstream 2000   false scaffold0103: 47503-49502 Medicago truncatula
Medtr0103s0090 5.0kb upstream 5.0kb upstream 10215   true scaffold0103: 37288-47502 Medicago truncatula
Medtr0103s0090 5.0kb upstream 5.0kb upstream 5000   false scaffold0103: 37288-42287 Medicago truncatula
Medtr0103s0090 5.0kb downstream 5.0kb downstream 9942   true scaffold0103: 42288-52229 Medicago truncatula
Medtr0103s0090 5.0kb downstream 5.0kb downstream 4727   false scaffold0103: 47503-52229 Medicago truncatula
Medtr0103s0090 10.0kb upstream 10.0kb upstream 15215   true scaffold0103: 32288-47502 Medicago truncatula
Medtr0103s0090 10.0kb upstream 10.0kb upstream 10000   false scaffold0103: 32288-42287 Medicago truncatula
Medtr0103s0090 10.0kb downstream 10.0kb downstream 9942   true scaffold0103: 42288-52229 Medicago truncatula
Medtr0103s0090 10.0kb downstream 10.0kb downstream 4727   false scaffold0103: 47503-52229 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309463 5265 Fabidae View MSA
124073140 5270 Rosid View MSA
123752640 5271 Pentapetalae View MSA
122797253 5272 Eudicot View MSA
122050761 5273 Angiosperm View MSA
121312106 5274 Embryophyte View MSA
123349308 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.945       High
cufflinks 0.636        
cufflinks 0.601        
cufflinks 0.999        
cufflinks 0.689        
cufflinks 0.473        
cufflinks 1.631        
cufflinks 0.591        
cufflinks 0.518        

0 Strain