Gene : Medtr8g005960 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31251:SF4 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 8 Description:  squamosa promoter-binding-like protein
Genomic Order:  52 Name:  ? Medtr8g005960
Secondary Identifier:  ? PAC:31072108
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g005960 0.5kb upstream 0.5kb upstream 2714   true chr8: 419202-421915 Medicago truncatula
Medtr8g005960 0.5kb upstream 0.5kb upstream 500   false chr8: 421416-421915 Medicago truncatula
Medtr8g005960 0.5kb downstream 0.5kb downstream 2714   true chr8: 418702-421415 Medicago truncatula
Medtr8g005960 0.5kb downstream 0.5kb downstream 500   false chr8: 418702-419201 Medicago truncatula
Medtr8g005960 1.0kb upstream 1.0kb upstream 3214   true chr8: 419202-422415 Medicago truncatula
Medtr8g005960 1.0kb upstream 1.0kb upstream 1000   false chr8: 421416-422415 Medicago truncatula
Medtr8g005960 1.0kb downstream 1.0kb downstream 3214   true chr8: 418202-421415 Medicago truncatula
Medtr8g005960 1.0kb downstream 1.0kb downstream 1000   false chr8: 418202-419201 Medicago truncatula
Medtr8g005960 2.0kb upstream 2.0kb upstream 4214   true chr8: 419202-423415 Medicago truncatula
Medtr8g005960 2.0kb upstream 2.0kb upstream 2000   false chr8: 421416-423415 Medicago truncatula
Medtr8g005960 2.0kb downstream 2.0kb downstream 4214   true chr8: 417202-421415 Medicago truncatula
Medtr8g005960 2.0kb downstream 2.0kb downstream 2000   false chr8: 417202-419201 Medicago truncatula
Medtr8g005960 5.0kb upstream 5.0kb upstream 7214   true chr8: 419202-426415 Medicago truncatula
Medtr8g005960 5.0kb upstream 5.0kb upstream 5000   false chr8: 421416-426415 Medicago truncatula
Medtr8g005960 5.0kb downstream 5.0kb downstream 7214   true chr8: 414202-421415 Medicago truncatula
Medtr8g005960 5.0kb downstream 5.0kb downstream 5000   false chr8: 414202-419201 Medicago truncatula
Medtr8g005960 10.0kb upstream 10.0kb upstream 12214   true chr8: 419202-431415 Medicago truncatula
Medtr8g005960 10.0kb upstream 10.0kb upstream 10000   false chr8: 421416-431415 Medicago truncatula
Medtr8g005960 10.0kb downstream 10.0kb downstream 12214   true chr8: 409202-421415 Medicago truncatula
Medtr8g005960 10.0kb downstream 10.0kb downstream 10000   false chr8: 409202-419201 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300489 5265 Fabidae View MSA
124061003 5270 Rosid View MSA
123751132 5271 Pentapetalae View MSA
122790055 5272 Eudicot View MSA
122042410 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121309962 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.016     Low Low
cufflinks 4.204        
cufflinks 3.189        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 8.414        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.104        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain