Gene : Medtr8g005285 M. truncatula Mt4.0v1
Defline:  (1 of 94) PF03140 - Plant protein of unknown function (DUF247) Description:  DUF247 domain protein
Genomic Order:  22 Name:  ? Medtr8g005285
Secondary Identifier:  ? PAC:31070486
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g005285 0.5kb upstream 0.5kb upstream 2000   true chr8: 151099-153098 Medicago truncatula
Medtr8g005285 0.5kb upstream 0.5kb upstream 500   false chr8: 151099-151598 Medicago truncatula
Medtr8g005285 0.5kb downstream 0.5kb downstream 2000   true chr8: 151599-153598 Medicago truncatula
Medtr8g005285 0.5kb downstream 0.5kb downstream 500   false chr8: 153099-153598 Medicago truncatula
Medtr8g005285 1.0kb upstream 1.0kb upstream 2500   true chr8: 150599-153098 Medicago truncatula
Medtr8g005285 1.0kb upstream 1.0kb upstream 1000   false chr8: 150599-151598 Medicago truncatula
Medtr8g005285 1.0kb downstream 1.0kb downstream 2500   true chr8: 151599-154098 Medicago truncatula
Medtr8g005285 1.0kb downstream 1.0kb downstream 1000   false chr8: 153099-154098 Medicago truncatula
Medtr8g005285 2.0kb upstream 2.0kb upstream 3500   true chr8: 149599-153098 Medicago truncatula
Medtr8g005285 2.0kb upstream 2.0kb upstream 2000   false chr8: 149599-151598 Medicago truncatula
Medtr8g005285 2.0kb downstream 2.0kb downstream 3500   true chr8: 151599-155098 Medicago truncatula
Medtr8g005285 2.0kb downstream 2.0kb downstream 2000   false chr8: 153099-155098 Medicago truncatula
Medtr8g005285 5.0kb upstream 5.0kb upstream 6500   true chr8: 146599-153098 Medicago truncatula
Medtr8g005285 5.0kb upstream 5.0kb upstream 5000   false chr8: 146599-151598 Medicago truncatula
Medtr8g005285 5.0kb downstream 5.0kb downstream 6500   true chr8: 151599-158098 Medicago truncatula
Medtr8g005285 5.0kb downstream 5.0kb downstream 5000   false chr8: 153099-158098 Medicago truncatula
Medtr8g005285 10.0kb upstream 10.0kb upstream 11500   true chr8: 141599-153098 Medicago truncatula
Medtr8g005285 10.0kb upstream 10.0kb upstream 10000   false chr8: 141599-151598 Medicago truncatula
Medtr8g005285 10.0kb downstream 10.0kb downstream 11500   true chr8: 151599-163098 Medicago truncatula
Medtr8g005285 10.0kb downstream 10.0kb downstream 10000   false chr8: 153099-163098 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314572 5265 Fabidae View MSA
124074599 5270 Rosid View MSA
123753721 5271 Pentapetalae View MSA
122797892 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.173       High
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.113        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.033     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain