Gene : Medtr8g005235 M. truncatula Mt4.0v1
Defline:  (1 of 94) PF03140 - Plant protein of unknown function (DUF247) Description:  DUF247 domain protein
Genomic Order:  18 Name:  ? Medtr8g005235
Secondary Identifier:  ? PAC:31076542
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g005235 0.5kb upstream 0.5kb upstream 1867   true chr8: 114885-116751 Medicago truncatula
Medtr8g005235 0.5kb upstream 0.5kb upstream 500   false chr8: 116252-116751 Medicago truncatula
Medtr8g005235 0.5kb downstream 0.5kb downstream 1867   true chr8: 114385-116251 Medicago truncatula
Medtr8g005235 0.5kb downstream 0.5kb downstream 500   false chr8: 114385-114884 Medicago truncatula
Medtr8g005235 1.0kb upstream 1.0kb upstream 2367   true chr8: 114885-117251 Medicago truncatula
Medtr8g005235 1.0kb upstream 1.0kb upstream 1000   false chr8: 116252-117251 Medicago truncatula
Medtr8g005235 1.0kb downstream 1.0kb downstream 2367   true chr8: 113885-116251 Medicago truncatula
Medtr8g005235 1.0kb downstream 1.0kb downstream 1000   false chr8: 113885-114884 Medicago truncatula
Medtr8g005235 2.0kb upstream 2.0kb upstream 3367   true chr8: 114885-118251 Medicago truncatula
Medtr8g005235 2.0kb upstream 2.0kb upstream 2000   false chr8: 116252-118251 Medicago truncatula
Medtr8g005235 2.0kb downstream 2.0kb downstream 3367   true chr8: 112885-116251 Medicago truncatula
Medtr8g005235 2.0kb downstream 2.0kb downstream 2000   false chr8: 112885-114884 Medicago truncatula
Medtr8g005235 5.0kb upstream 5.0kb upstream 6367   true chr8: 114885-121251 Medicago truncatula
Medtr8g005235 5.0kb upstream 5.0kb upstream 5000   false chr8: 116252-121251 Medicago truncatula
Medtr8g005235 5.0kb downstream 5.0kb downstream 6367   true chr8: 109885-116251 Medicago truncatula
Medtr8g005235 5.0kb downstream 5.0kb downstream 5000   false chr8: 109885-114884 Medicago truncatula
Medtr8g005235 10.0kb upstream 10.0kb upstream 11367   true chr8: 114885-126251 Medicago truncatula
Medtr8g005235 10.0kb upstream 10.0kb upstream 10000   false chr8: 116252-126251 Medicago truncatula
Medtr8g005235 10.0kb downstream 10.0kb downstream 11367   true chr8: 104885-116251 Medicago truncatula
Medtr8g005235 10.0kb downstream 10.0kb downstream 10000   false chr8: 104885-114884 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314572 5265 Fabidae View MSA
124074599 5270 Rosid View MSA
123753721 5271 Pentapetalae View MSA
122797892 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.037     Low  
cufflinks 0.149        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.134        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low Low
cufflinks 0.165        
cufflinks 0.022     Low  

0 Strain