Gene : Medtr0004s0600 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR18916 - DYNACTIN 1-RELATED MICROTUBULE-BINDING Description:  tubulin folding cofactor B
Genomic Order:  19 Name:  ? Medtr0004s0600
Secondary Identifier:  ? PAC:31076721
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0004s0600 0.5kb upstream 0.5kb upstream 4482   true scaffold0004: 337723-342204 Medicago truncatula
Medtr0004s0600 0.5kb upstream 0.5kb upstream 500   false scaffold0004: 337723-338222 Medicago truncatula
Medtr0004s0600 0.5kb downstream 0.5kb downstream 4482   true scaffold0004: 338223-342704 Medicago truncatula
Medtr0004s0600 0.5kb downstream 0.5kb downstream 500   false scaffold0004: 342205-342704 Medicago truncatula
Medtr0004s0600 1.0kb upstream 1.0kb upstream 4982   true scaffold0004: 337223-342204 Medicago truncatula
Medtr0004s0600 1.0kb upstream 1.0kb upstream 1000   false scaffold0004: 337223-338222 Medicago truncatula
Medtr0004s0600 1.0kb downstream 1.0kb downstream 4982   true scaffold0004: 338223-343204 Medicago truncatula
Medtr0004s0600 1.0kb downstream 1.0kb downstream 1000   false scaffold0004: 342205-343204 Medicago truncatula
Medtr0004s0600 2.0kb upstream 2.0kb upstream 5982   true scaffold0004: 336223-342204 Medicago truncatula
Medtr0004s0600 2.0kb upstream 2.0kb upstream 2000   false scaffold0004: 336223-338222 Medicago truncatula
Medtr0004s0600 2.0kb downstream 2.0kb downstream 5982   true scaffold0004: 338223-344204 Medicago truncatula
Medtr0004s0600 2.0kb downstream 2.0kb downstream 2000   false scaffold0004: 342205-344204 Medicago truncatula
Medtr0004s0600 5.0kb upstream 5.0kb upstream 8982   true scaffold0004: 333223-342204 Medicago truncatula
Medtr0004s0600 5.0kb upstream 5.0kb upstream 5000   false scaffold0004: 333223-338222 Medicago truncatula
Medtr0004s0600 5.0kb downstream 5.0kb downstream 8982   true scaffold0004: 338223-347204 Medicago truncatula
Medtr0004s0600 5.0kb downstream 5.0kb downstream 5000   false scaffold0004: 342205-347204 Medicago truncatula
Medtr0004s0600 10.0kb upstream 10.0kb upstream 13982   true scaffold0004: 328223-342204 Medicago truncatula
Medtr0004s0600 10.0kb upstream 10.0kb upstream 10000   false scaffold0004: 328223-338222 Medicago truncatula
Medtr0004s0600 10.0kb downstream 10.0kb downstream 13982   true scaffold0004: 338223-352204 Medicago truncatula
Medtr0004s0600 10.0kb downstream 10.0kb downstream 10000   false scaffold0004: 342205-352204 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305837 5265 Fabidae View MSA
124068884 5270 Rosid View MSA
123738129 5271 Pentapetalae View MSA
122795484 5272 Eudicot View MSA
122045722 5273 Angiosperm View MSA
121345954 5274 Embryophyte View MSA
123423760 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.634       High
cufflinks 0.265        
cufflinks 0.324        
cufflinks 0.291        
cufflinks 0.364        
cufflinks 0.227       Low
cufflinks 0.271        
cufflinks 0.264        
cufflinks 0.471       High

0 Strain