Gene : Medtr0003s0560 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR11802:SF66 - SERINE CARBOXYPEPTIDASE-LIKE 36-RELATED Description:  serine carboxypeptidase-like protein
Genomic Order:  27 Name:  ? Medtr0003s0560
Secondary Identifier:  ? PAC:31105818
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0003s0560 0.5kb upstream 0.5kb upstream 6914   true scaffold0003: 312284-319197 Medicago truncatula
Medtr0003s0560 0.5kb upstream 0.5kb upstream 500   false scaffold0003: 318698-319197 Medicago truncatula
Medtr0003s0560 0.5kb downstream 0.5kb downstream 6914   true scaffold0003: 311784-318697 Medicago truncatula
Medtr0003s0560 0.5kb downstream 0.5kb downstream 500   false scaffold0003: 311784-312283 Medicago truncatula
Medtr0003s0560 1.0kb upstream 1.0kb upstream 7414   true scaffold0003: 312284-319697 Medicago truncatula
Medtr0003s0560 1.0kb upstream 1.0kb upstream 1000   false scaffold0003: 318698-319697 Medicago truncatula
Medtr0003s0560 1.0kb downstream 1.0kb downstream 7414   true scaffold0003: 311284-318697 Medicago truncatula
Medtr0003s0560 1.0kb downstream 1.0kb downstream 1000   false scaffold0003: 311284-312283 Medicago truncatula
Medtr0003s0560 2.0kb upstream 2.0kb upstream 8414   true scaffold0003: 312284-320697 Medicago truncatula
Medtr0003s0560 2.0kb upstream 2.0kb upstream 2000   false scaffold0003: 318698-320697 Medicago truncatula
Medtr0003s0560 2.0kb downstream 2.0kb downstream 8414   true scaffold0003: 310284-318697 Medicago truncatula
Medtr0003s0560 2.0kb downstream 2.0kb downstream 2000   false scaffold0003: 310284-312283 Medicago truncatula
Medtr0003s0560 5.0kb upstream 5.0kb upstream 11414   true scaffold0003: 312284-323697 Medicago truncatula
Medtr0003s0560 5.0kb upstream 5.0kb upstream 5000   false scaffold0003: 318698-323697 Medicago truncatula
Medtr0003s0560 5.0kb downstream 5.0kb downstream 11414   true scaffold0003: 307284-318697 Medicago truncatula
Medtr0003s0560 5.0kb downstream 5.0kb downstream 5000   false scaffold0003: 307284-312283 Medicago truncatula
Medtr0003s0560 10.0kb upstream 10.0kb upstream 16414   true scaffold0003: 312284-328697 Medicago truncatula
Medtr0003s0560 10.0kb upstream 10.0kb upstream 10000   false scaffold0003: 318698-328697 Medicago truncatula
Medtr0003s0560 10.0kb downstream 10.0kb downstream 16414   true scaffold0003: 302284-318697 Medicago truncatula
Medtr0003s0560 10.0kb downstream 10.0kb downstream 10000   false scaffold0003: 302284-312283 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311307 5265 Fabidae View MSA
124067416 5270 Rosid View MSA
123753218 5271 Pentapetalae View MSA
122797731 5272 Eudicot View MSA
122048789 5273 Angiosperm View MSA
121311114 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.535     High High
cufflinks 13.511     High  
cufflinks 9.76        
cufflinks 2.789       Low
cufflinks 9.969        
cufflinks 1.9       Low
cufflinks 5.251        
cufflinks 12.798     High  
cufflinks 3.795        

0 Strain