Gene : Medtr0018s0290 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21013 - ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 2/ATP12 PROTEIN, MITOCHONDRIAL PRECURSOR Description:  ATP synthase F1 complex assembly factor 2, putative
Genomic Order:  8 Name:  ? Medtr0018s0290
Secondary Identifier:  ? PAC:31105780
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0018s0290 0.5kb upstream 0.5kb upstream 5078   true scaffold0018: 174997-180074 Medicago truncatula
Medtr0018s0290 0.5kb upstream 0.5kb upstream 500   false scaffold0018: 179575-180074 Medicago truncatula
Medtr0018s0290 0.5kb downstream 0.5kb downstream 5078   true scaffold0018: 174497-179574 Medicago truncatula
Medtr0018s0290 0.5kb downstream 0.5kb downstream 500   false scaffold0018: 174497-174996 Medicago truncatula
Medtr0018s0290 1.0kb upstream 1.0kb upstream 5578   true scaffold0018: 174997-180574 Medicago truncatula
Medtr0018s0290 1.0kb upstream 1.0kb upstream 1000   false scaffold0018: 179575-180574 Medicago truncatula
Medtr0018s0290 1.0kb downstream 1.0kb downstream 5578   true scaffold0018: 173997-179574 Medicago truncatula
Medtr0018s0290 1.0kb downstream 1.0kb downstream 1000   false scaffold0018: 173997-174996 Medicago truncatula
Medtr0018s0290 2.0kb upstream 2.0kb upstream 6578   true scaffold0018: 174997-181574 Medicago truncatula
Medtr0018s0290 2.0kb upstream 2.0kb upstream 2000   false scaffold0018: 179575-181574 Medicago truncatula
Medtr0018s0290 2.0kb downstream 2.0kb downstream 6578   true scaffold0018: 172997-179574 Medicago truncatula
Medtr0018s0290 2.0kb downstream 2.0kb downstream 2000   false scaffold0018: 172997-174996 Medicago truncatula
Medtr0018s0290 5.0kb upstream 5.0kb upstream 9578   true scaffold0018: 174997-184574 Medicago truncatula
Medtr0018s0290 5.0kb upstream 5.0kb upstream 5000   false scaffold0018: 179575-184574 Medicago truncatula
Medtr0018s0290 5.0kb downstream 5.0kb downstream 9578   true scaffold0018: 169997-179574 Medicago truncatula
Medtr0018s0290 5.0kb downstream 5.0kb downstream 5000   false scaffold0018: 169997-174996 Medicago truncatula
Medtr0018s0290 10.0kb upstream 10.0kb upstream 14578   true scaffold0018: 174997-189574 Medicago truncatula
Medtr0018s0290 10.0kb upstream 10.0kb upstream 10000   false scaffold0018: 179575-189574 Medicago truncatula
Medtr0018s0290 10.0kb downstream 10.0kb downstream 14578   true scaffold0018: 164997-179574 Medicago truncatula
Medtr0018s0290 10.0kb downstream 10.0kb downstream 10000   false scaffold0018: 164997-174996 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307417 5265 Fabidae View MSA
124066318 5270 Rosid View MSA
123746720 5271 Pentapetalae View MSA
122791675 5272 Eudicot View MSA
122045593 5273 Angiosperm View MSA
121344547 5274 Embryophyte View MSA
123428622 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.786       Low
cufflinks 2.089        
cufflinks 3.312        
cufflinks 5.787       High
cufflinks 2.789        
cufflinks 3.744        
cufflinks 2.487        
cufflinks 2.566        
cufflinks 3.552        

0 Strain