Gene : Medtr0018s0220 M. truncatula Mt4.0v1
Defline:  (1 of 8) PTHR18966//PTHR18966:SF202 - IONOTROPIC GLUTAMATE RECEPTOR Description:  transmembrane protein, putative
Genomic Order:  4 Name:  ? Medtr0018s0220
Secondary Identifier:  ? PAC:31105777
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0018s0220 0.5kb upstream 0.5kb upstream 1372   true scaffold0018: 136958-138329 Medicago truncatula
Medtr0018s0220 0.5kb upstream 0.5kb upstream 500   false scaffold0018: 136958-137457 Medicago truncatula
Medtr0018s0220 0.5kb downstream 0.5kb downstream 1372   true scaffold0018: 137458-138829 Medicago truncatula
Medtr0018s0220 0.5kb downstream 0.5kb downstream 500   false scaffold0018: 138330-138829 Medicago truncatula
Medtr0018s0220 1.0kb upstream 1.0kb upstream 1872   true scaffold0018: 136458-138329 Medicago truncatula
Medtr0018s0220 1.0kb upstream 1.0kb upstream 1000   false scaffold0018: 136458-137457 Medicago truncatula
Medtr0018s0220 1.0kb downstream 1.0kb downstream 1872   true scaffold0018: 137458-139329 Medicago truncatula
Medtr0018s0220 1.0kb downstream 1.0kb downstream 1000   false scaffold0018: 138330-139329 Medicago truncatula
Medtr0018s0220 2.0kb upstream 2.0kb upstream 2872   true scaffold0018: 135458-138329 Medicago truncatula
Medtr0018s0220 2.0kb upstream 2.0kb upstream 2000   false scaffold0018: 135458-137457 Medicago truncatula
Medtr0018s0220 2.0kb downstream 2.0kb downstream 2872   true scaffold0018: 137458-140329 Medicago truncatula
Medtr0018s0220 2.0kb downstream 2.0kb downstream 2000   false scaffold0018: 138330-140329 Medicago truncatula
Medtr0018s0220 5.0kb upstream 5.0kb upstream 5872   true scaffold0018: 132458-138329 Medicago truncatula
Medtr0018s0220 5.0kb upstream 5.0kb upstream 5000   false scaffold0018: 132458-137457 Medicago truncatula
Medtr0018s0220 5.0kb downstream 5.0kb downstream 5872   true scaffold0018: 137458-143329 Medicago truncatula
Medtr0018s0220 5.0kb downstream 5.0kb downstream 5000   false scaffold0018: 138330-143329 Medicago truncatula
Medtr0018s0220 10.0kb upstream 10.0kb upstream 10872   true scaffold0018: 127458-138329 Medicago truncatula
Medtr0018s0220 10.0kb upstream 10.0kb upstream 10000   false scaffold0018: 127458-137457 Medicago truncatula
Medtr0018s0220 10.0kb downstream 10.0kb downstream 10872   true scaffold0018: 137458-148329 Medicago truncatula
Medtr0018s0220 10.0kb downstream 10.0kb downstream 10000   false scaffold0018: 138330-148329 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657782 5273 Angiosperm View MSA
122296357 5265 Fabidae View MSA
124040123 5270 Rosid View MSA
123611690 5271 Pentapetalae View MSA
122646240 5272 Eudicot View MSA
120929812 5274 Embryophyte View MSA
122970365 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.024     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.214        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.076     Low  

0 Strain