Gene : Medtr0021s0130 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  2
Name:  ? Medtr0021s0130 Secondary Identifier:  ? PAC:31061966
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0021s0130 0.5kb upstream 0.5kb upstream 938   true scaffold0021: 47224-48161 Medicago truncatula
Medtr0021s0130 0.5kb upstream 0.5kb upstream 500   false scaffold0021: 47224-47723 Medicago truncatula
Medtr0021s0130 0.5kb downstream 0.5kb downstream 938   true scaffold0021: 47724-48661 Medicago truncatula
Medtr0021s0130 0.5kb downstream 0.5kb downstream 500   false scaffold0021: 48162-48661 Medicago truncatula
Medtr0021s0130 1.0kb upstream 1.0kb upstream 1438   true scaffold0021: 46724-48161 Medicago truncatula
Medtr0021s0130 1.0kb upstream 1.0kb upstream 1000   false scaffold0021: 46724-47723 Medicago truncatula
Medtr0021s0130 1.0kb downstream 1.0kb downstream 1438   true scaffold0021: 47724-49161 Medicago truncatula
Medtr0021s0130 1.0kb downstream 1.0kb downstream 1000   false scaffold0021: 48162-49161 Medicago truncatula
Medtr0021s0130 2.0kb upstream 2.0kb upstream 2438   true scaffold0021: 45724-48161 Medicago truncatula
Medtr0021s0130 2.0kb upstream 2.0kb upstream 2000   false scaffold0021: 45724-47723 Medicago truncatula
Medtr0021s0130 2.0kb downstream 2.0kb downstream 2438   true scaffold0021: 47724-50161 Medicago truncatula
Medtr0021s0130 2.0kb downstream 2.0kb downstream 2000   false scaffold0021: 48162-50161 Medicago truncatula
Medtr0021s0130 5.0kb upstream 5.0kb upstream 5438   true scaffold0021: 42724-48161 Medicago truncatula
Medtr0021s0130 5.0kb upstream 5.0kb upstream 5000   false scaffold0021: 42724-47723 Medicago truncatula
Medtr0021s0130 5.0kb downstream 5.0kb downstream 5438   true scaffold0021: 47724-53161 Medicago truncatula
Medtr0021s0130 5.0kb downstream 5.0kb downstream 5000   false scaffold0021: 48162-53161 Medicago truncatula
Medtr0021s0130 10.0kb upstream 10.0kb upstream 10438   true scaffold0021: 37724-48161 Medicago truncatula
Medtr0021s0130 10.0kb upstream 10.0kb upstream 10000   false scaffold0021: 37724-47723 Medicago truncatula
Medtr0021s0130 10.0kb downstream 10.0kb downstream 10438   true scaffold0021: 47724-58161 Medicago truncatula
Medtr0021s0130 10.0kb downstream 10.0kb downstream 10000   false scaffold0021: 48162-58161 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121631571 5273 Angiosperm Singleton cluster - no MSA
122270185 5265 Fabidae Singleton cluster - no MSA
124010904 5270 Rosid Singleton cluster - no MSA
123584825 5271 Pentapetalae Singleton cluster - no MSA
122619524 5272 Eudicot Singleton cluster - no MSA
120903675 5274 Embryophyte Singleton cluster - no MSA
122944330 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.033     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain