Gene : Medtr8g442420 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11071:SF156 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4 Description:  peptidyl-prolyl cis-trans isomerase-like protein
Genomic Order:  2092 Name:  ? Medtr8g442420
Secondary Identifier:  ? PAC:31075209
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g442420 0.5kb upstream 0.5kb upstream 7889   true chr8: 16029239-16037127 Medicago truncatula
Medtr8g442420 0.5kb upstream 0.5kb upstream 500   false chr8: 16036628-16037127 Medicago truncatula
Medtr8g442420 0.5kb downstream 0.5kb downstream 7889   true chr8: 16028739-16036627 Medicago truncatula
Medtr8g442420 0.5kb downstream 0.5kb downstream 500   false chr8: 16028739-16029238 Medicago truncatula
Medtr8g442420 1.0kb upstream 1.0kb upstream 8389   true chr8: 16029239-16037627 Medicago truncatula
Medtr8g442420 1.0kb upstream 1.0kb upstream 1000   false chr8: 16036628-16037627 Medicago truncatula
Medtr8g442420 1.0kb downstream 1.0kb downstream 8389   true chr8: 16028239-16036627 Medicago truncatula
Medtr8g442420 1.0kb downstream 1.0kb downstream 1000   false chr8: 16028239-16029238 Medicago truncatula
Medtr8g442420 2.0kb upstream 2.0kb upstream 9389   true chr8: 16029239-16038627 Medicago truncatula
Medtr8g442420 2.0kb upstream 2.0kb upstream 2000   false chr8: 16036628-16038627 Medicago truncatula
Medtr8g442420 2.0kb downstream 2.0kb downstream 9389   true chr8: 16027239-16036627 Medicago truncatula
Medtr8g442420 2.0kb downstream 2.0kb downstream 2000   false chr8: 16027239-16029238 Medicago truncatula
Medtr8g442420 5.0kb upstream 5.0kb upstream 12389   true chr8: 16029239-16041627 Medicago truncatula
Medtr8g442420 5.0kb upstream 5.0kb upstream 5000   false chr8: 16036628-16041627 Medicago truncatula
Medtr8g442420 5.0kb downstream 5.0kb downstream 12389   true chr8: 16024239-16036627 Medicago truncatula
Medtr8g442420 5.0kb downstream 5.0kb downstream 5000   false chr8: 16024239-16029238 Medicago truncatula
Medtr8g442420 10.0kb upstream 10.0kb upstream 17389   true chr8: 16029239-16046627 Medicago truncatula
Medtr8g442420 10.0kb upstream 10.0kb upstream 10000   false chr8: 16036628-16046627 Medicago truncatula
Medtr8g442420 10.0kb downstream 10.0kb downstream 17389   true chr8: 16019239-16036627 Medicago truncatula
Medtr8g442420 10.0kb downstream 10.0kb downstream 10000   false chr8: 16019239-16029238 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301847 5265 Fabidae View MSA
124062443 5270 Rosid View MSA
123738773 5271 Pentapetalae View MSA
122790926 5272 Eudicot View MSA
122041722 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121349576 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.977        
cufflinks 3.608        
cufflinks 5.452       High
cufflinks 1.202       Low
cufflinks 3.981        
cufflinks 1.603        
cufflinks 1.917        
cufflinks 5.241       High
cufflinks 0.827       Low

0 Strain