Gene : Medtr8g105700 M. truncatula Mt4.0v1
Defline:  (1 of 14) PF01823 - MAC/Perforin domain (MACPF) Description:  MACPF domain protein
Genomic Order:  5647 Name:  ? Medtr8g105700
Secondary Identifier:  ? PAC:31070746
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g105700 0.5kb upstream 0.5kb upstream 4252   true chr8: 44572896-44577147 Medicago truncatula
Medtr8g105700 0.5kb upstream 0.5kb upstream 500   false chr8: 44576648-44577147 Medicago truncatula
Medtr8g105700 0.5kb downstream 0.5kb downstream 4252   true chr8: 44572396-44576647 Medicago truncatula
Medtr8g105700 0.5kb downstream 0.5kb downstream 500   false chr8: 44572396-44572895 Medicago truncatula
Medtr8g105700 1.0kb upstream 1.0kb upstream 4752   true chr8: 44572896-44577647 Medicago truncatula
Medtr8g105700 1.0kb upstream 1.0kb upstream 1000   false chr8: 44576648-44577647 Medicago truncatula
Medtr8g105700 1.0kb downstream 1.0kb downstream 4752   true chr8: 44571896-44576647 Medicago truncatula
Medtr8g105700 1.0kb downstream 1.0kb downstream 1000   false chr8: 44571896-44572895 Medicago truncatula
Medtr8g105700 2.0kb upstream 2.0kb upstream 5752   true chr8: 44572896-44578647 Medicago truncatula
Medtr8g105700 2.0kb upstream 2.0kb upstream 2000   false chr8: 44576648-44578647 Medicago truncatula
Medtr8g105700 2.0kb downstream 2.0kb downstream 5752   true chr8: 44570896-44576647 Medicago truncatula
Medtr8g105700 2.0kb downstream 2.0kb downstream 2000   false chr8: 44570896-44572895 Medicago truncatula
Medtr8g105700 5.0kb upstream 5.0kb upstream 8752   true chr8: 44572896-44581647 Medicago truncatula
Medtr8g105700 5.0kb upstream 5.0kb upstream 5000   false chr8: 44576648-44581647 Medicago truncatula
Medtr8g105700 5.0kb downstream 5.0kb downstream 8752   true chr8: 44567896-44576647 Medicago truncatula
Medtr8g105700 5.0kb downstream 5.0kb downstream 5000   false chr8: 44567896-44572895 Medicago truncatula
Medtr8g105700 10.0kb upstream 10.0kb upstream 13752   true chr8: 44572896-44586647 Medicago truncatula
Medtr8g105700 10.0kb upstream 10.0kb upstream 10000   false chr8: 44576648-44586647 Medicago truncatula
Medtr8g105700 10.0kb downstream 10.0kb downstream 13752   true chr8: 44562896-44576647 Medicago truncatula
Medtr8g105700 10.0kb downstream 10.0kb downstream 10000   false chr8: 44562896-44572895 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303456 5265 Fabidae View MSA
124070099 5270 Rosid View MSA
123749357 5271 Pentapetalae View MSA
122797493 5272 Eudicot View MSA
122048328 5273 Angiosperm View MSA
121310931 5274 Embryophyte View MSA
123348303 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.12        
cufflinks 1.365        
cufflinks 0.638       Low
cufflinks 3.564        
cufflinks 1.105        
cufflinks 4.244        
cufflinks 10.748     High High
cufflinks 0.869       Low
cufflinks 7.334       High

0 Strain