Gene : Medtr8g105270 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR16023 - TAX1 BINDING PROTEIN-RELATED Description:  vacuolar 14 Fab1-binding region protein
Genomic Order:  5628 Name:  ? Medtr8g105270
Secondary Identifier:  ? PAC:31071090
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g105270 0.5kb upstream 0.5kb upstream 9793   true chr8: 44400965-44410757 Medicago truncatula
Medtr8g105270 0.5kb upstream 0.5kb upstream 500   false chr8: 44410258-44410757 Medicago truncatula
Medtr8g105270 0.5kb downstream 0.5kb downstream 9793   true chr8: 44400465-44410257 Medicago truncatula
Medtr8g105270 0.5kb downstream 0.5kb downstream 500   false chr8: 44400465-44400964 Medicago truncatula
Medtr8g105270 1.0kb upstream 1.0kb upstream 10293   true chr8: 44400965-44411257 Medicago truncatula
Medtr8g105270 1.0kb upstream 1.0kb upstream 1000   false chr8: 44410258-44411257 Medicago truncatula
Medtr8g105270 1.0kb downstream 1.0kb downstream 10293   true chr8: 44399965-44410257 Medicago truncatula
Medtr8g105270 1.0kb downstream 1.0kb downstream 1000   false chr8: 44399965-44400964 Medicago truncatula
Medtr8g105270 2.0kb upstream 2.0kb upstream 11293   true chr8: 44400965-44412257 Medicago truncatula
Medtr8g105270 2.0kb upstream 2.0kb upstream 2000   false chr8: 44410258-44412257 Medicago truncatula
Medtr8g105270 2.0kb downstream 2.0kb downstream 11293   true chr8: 44398965-44410257 Medicago truncatula
Medtr8g105270 2.0kb downstream 2.0kb downstream 2000   false chr8: 44398965-44400964 Medicago truncatula
Medtr8g105270 5.0kb upstream 5.0kb upstream 14293   true chr8: 44400965-44415257 Medicago truncatula
Medtr8g105270 5.0kb upstream 5.0kb upstream 5000   false chr8: 44410258-44415257 Medicago truncatula
Medtr8g105270 5.0kb downstream 5.0kb downstream 14293   true chr8: 44395965-44410257 Medicago truncatula
Medtr8g105270 5.0kb downstream 5.0kb downstream 5000   false chr8: 44395965-44400964 Medicago truncatula
Medtr8g105270 10.0kb upstream 10.0kb upstream 19293   true chr8: 44400965-44420257 Medicago truncatula
Medtr8g105270 10.0kb upstream 10.0kb upstream 10000   false chr8: 44410258-44420257 Medicago truncatula
Medtr8g105270 10.0kb downstream 10.0kb downstream 19293   true chr8: 44390965-44410257 Medicago truncatula
Medtr8g105270 10.0kb downstream 10.0kb downstream 10000   false chr8: 44390965-44400964 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311338 5265 Fabidae View MSA
124065694 5270 Rosid View MSA
123742158 5271 Pentapetalae View MSA
122787400 5272 Eudicot View MSA
122047421 5273 Angiosperm View MSA
121346915 5274 Embryophyte View MSA
123428205 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.053        
cufflinks 1.934        
cufflinks 2.803       High
cufflinks 1.243       Low
cufflinks 1.996        
cufflinks 1.412       Low
cufflinks 1.887        
cufflinks 2.581       High
cufflinks 1.412       Low

0 Strain