Gene : Medtr8g105250 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12555//PTHR12555:SF16 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 Description:  ubiquitin fusion degradation 1 protein
Genomic Order:  5626 Name:  ? Medtr8g105250
Secondary Identifier:  ? PAC:31070096
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g105250 0.5kb upstream 0.5kb upstream 5411   true chr8: 44389103-44394513 Medicago truncatula
Medtr8g105250 0.5kb upstream 0.5kb upstream 500   false chr8: 44389103-44389602 Medicago truncatula
Medtr8g105250 0.5kb downstream 0.5kb downstream 5411   true chr8: 44389603-44395013 Medicago truncatula
Medtr8g105250 0.5kb downstream 0.5kb downstream 500   false chr8: 44394514-44395013 Medicago truncatula
Medtr8g105250 1.0kb upstream 1.0kb upstream 5911   true chr8: 44388603-44394513 Medicago truncatula
Medtr8g105250 1.0kb upstream 1.0kb upstream 1000   false chr8: 44388603-44389602 Medicago truncatula
Medtr8g105250 1.0kb downstream 1.0kb downstream 5911   true chr8: 44389603-44395513 Medicago truncatula
Medtr8g105250 1.0kb downstream 1.0kb downstream 1000   false chr8: 44394514-44395513 Medicago truncatula
Medtr8g105250 2.0kb upstream 2.0kb upstream 6911   true chr8: 44387603-44394513 Medicago truncatula
Medtr8g105250 2.0kb upstream 2.0kb upstream 2000   false chr8: 44387603-44389602 Medicago truncatula
Medtr8g105250 2.0kb downstream 2.0kb downstream 6911   true chr8: 44389603-44396513 Medicago truncatula
Medtr8g105250 2.0kb downstream 2.0kb downstream 2000   false chr8: 44394514-44396513 Medicago truncatula
Medtr8g105250 5.0kb upstream 5.0kb upstream 9911   true chr8: 44384603-44394513 Medicago truncatula
Medtr8g105250 5.0kb upstream 5.0kb upstream 5000   false chr8: 44384603-44389602 Medicago truncatula
Medtr8g105250 5.0kb downstream 5.0kb downstream 9911   true chr8: 44389603-44399513 Medicago truncatula
Medtr8g105250 5.0kb downstream 5.0kb downstream 5000   false chr8: 44394514-44399513 Medicago truncatula
Medtr8g105250 10.0kb upstream 10.0kb upstream 14911   true chr8: 44379603-44394513 Medicago truncatula
Medtr8g105250 10.0kb upstream 10.0kb upstream 10000   false chr8: 44379603-44389602 Medicago truncatula
Medtr8g105250 10.0kb downstream 10.0kb downstream 14911   true chr8: 44389603-44404513 Medicago truncatula
Medtr8g105250 10.0kb downstream 10.0kb downstream 10000   false chr8: 44394514-44404513 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299203 5265 Fabidae View MSA
124066093 5270 Rosid View MSA
123740128 5271 Pentapetalae View MSA
122786879 5272 Eudicot View MSA
122047756 5273 Angiosperm View MSA
123429180 5275 Viridiplantae View MSA
121346012 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.473     High  
cufflinks 8.31        
cufflinks 8.299        
cufflinks 7.437        
cufflinks 8.848        
cufflinks 3.591       Low
cufflinks 11.013     High  
cufflinks 6.978        
cufflinks 12.449     High High

0 Strain