Gene : Medtr8g106820 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR19856 - WD-REPEATCONTAINING PROTEIN WDR1 Description:  transducin/WD40 repeat protein
Genomic Order:  5720 Name:  ? Medtr8g106820
Secondary Identifier:  ? PAC:31073488
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g106820 0.5kb upstream 0.5kb upstream 6368   true chr8: 45094020-45100387 Medicago truncatula
Medtr8g106820 0.5kb upstream 0.5kb upstream 500   false chr8: 45099888-45100387 Medicago truncatula
Medtr8g106820 0.5kb downstream 0.5kb downstream 6368   true chr8: 45093520-45099887 Medicago truncatula
Medtr8g106820 0.5kb downstream 0.5kb downstream 500   false chr8: 45093520-45094019 Medicago truncatula
Medtr8g106820 1.0kb upstream 1.0kb upstream 6868   true chr8: 45094020-45100887 Medicago truncatula
Medtr8g106820 1.0kb upstream 1.0kb upstream 1000   false chr8: 45099888-45100887 Medicago truncatula
Medtr8g106820 1.0kb downstream 1.0kb downstream 6868   true chr8: 45093020-45099887 Medicago truncatula
Medtr8g106820 1.0kb downstream 1.0kb downstream 1000   false chr8: 45093020-45094019 Medicago truncatula
Medtr8g106820 2.0kb upstream 2.0kb upstream 7868   true chr8: 45094020-45101887 Medicago truncatula
Medtr8g106820 2.0kb upstream 2.0kb upstream 2000   false chr8: 45099888-45101887 Medicago truncatula
Medtr8g106820 2.0kb downstream 2.0kb downstream 7868   true chr8: 45092020-45099887 Medicago truncatula
Medtr8g106820 2.0kb downstream 2.0kb downstream 2000   false chr8: 45092020-45094019 Medicago truncatula
Medtr8g106820 5.0kb upstream 5.0kb upstream 10868   true chr8: 45094020-45104887 Medicago truncatula
Medtr8g106820 5.0kb upstream 5.0kb upstream 5000   false chr8: 45099888-45104887 Medicago truncatula
Medtr8g106820 5.0kb downstream 5.0kb downstream 10868   true chr8: 45089020-45099887 Medicago truncatula
Medtr8g106820 5.0kb downstream 5.0kb downstream 5000   false chr8: 45089020-45094019 Medicago truncatula
Medtr8g106820 10.0kb upstream 10.0kb upstream 15868   true chr8: 45094020-45109887 Medicago truncatula
Medtr8g106820 10.0kb upstream 10.0kb upstream 10000   false chr8: 45099888-45109887 Medicago truncatula
Medtr8g106820 10.0kb downstream 10.0kb downstream 15868   true chr8: 45084020-45099887 Medicago truncatula
Medtr8g106820 10.0kb downstream 10.0kb downstream 10000   false chr8: 45084020-45094019 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299766 5265 Fabidae View MSA
124062594 5270 Rosid View MSA
123741573 5271 Pentapetalae View MSA
122790877 5272 Eudicot View MSA
122044003 5273 Angiosperm View MSA
121344306 5274 Embryophyte View MSA
123425360 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.382       Low
cufflinks 11.5     High  
cufflinks 12.161     High  
cufflinks 5.304        
cufflinks 10.999     High  
cufflinks 3.634       Low
cufflinks 8.336        
cufflinks 10.068     High  
cufflinks 11.363     High  

0 Strain