Gene : Medtr8g106560 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10682:SF10 - FI03258P Description:  poly(A) polymerase-like protein
Genomic Order:  5697 Name:  ? Medtr8g106560
Secondary Identifier:  ? PAC:31069482
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g106560 0.5kb upstream 0.5kb upstream 6959   true chr8: 44960863-44967821 Medicago truncatula
Medtr8g106560 0.5kb upstream 0.5kb upstream 500   false chr8: 44967322-44967821 Medicago truncatula
Medtr8g106560 0.5kb downstream 0.5kb downstream 6959   true chr8: 44960363-44967321 Medicago truncatula
Medtr8g106560 0.5kb downstream 0.5kb downstream 500   false chr8: 44960363-44960862 Medicago truncatula
Medtr8g106560 1.0kb upstream 1.0kb upstream 7459   true chr8: 44960863-44968321 Medicago truncatula
Medtr8g106560 1.0kb upstream 1.0kb upstream 1000   false chr8: 44967322-44968321 Medicago truncatula
Medtr8g106560 1.0kb downstream 1.0kb downstream 7459   true chr8: 44959863-44967321 Medicago truncatula
Medtr8g106560 1.0kb downstream 1.0kb downstream 1000   false chr8: 44959863-44960862 Medicago truncatula
Medtr8g106560 2.0kb upstream 2.0kb upstream 8459   true chr8: 44960863-44969321 Medicago truncatula
Medtr8g106560 2.0kb upstream 2.0kb upstream 2000   false chr8: 44967322-44969321 Medicago truncatula
Medtr8g106560 2.0kb downstream 2.0kb downstream 8459   true chr8: 44958863-44967321 Medicago truncatula
Medtr8g106560 2.0kb downstream 2.0kb downstream 2000   false chr8: 44958863-44960862 Medicago truncatula
Medtr8g106560 5.0kb upstream 5.0kb upstream 11459   true chr8: 44960863-44972321 Medicago truncatula
Medtr8g106560 5.0kb upstream 5.0kb upstream 5000   false chr8: 44967322-44972321 Medicago truncatula
Medtr8g106560 5.0kb downstream 5.0kb downstream 11459   true chr8: 44955863-44967321 Medicago truncatula
Medtr8g106560 5.0kb downstream 5.0kb downstream 5000   false chr8: 44955863-44960862 Medicago truncatula
Medtr8g106560 10.0kb upstream 10.0kb upstream 16459   true chr8: 44960863-44977321 Medicago truncatula
Medtr8g106560 10.0kb upstream 10.0kb upstream 10000   false chr8: 44967322-44977321 Medicago truncatula
Medtr8g106560 10.0kb downstream 10.0kb downstream 16459   true chr8: 44950863-44967321 Medicago truncatula
Medtr8g106560 10.0kb downstream 10.0kb downstream 10000   false chr8: 44950863-44960862 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311192 5265 Fabidae View MSA
124068405 5270 Rosid View MSA
123750004 5271 Pentapetalae View MSA
122790676 5272 Eudicot View MSA
122041871 5273 Angiosperm View MSA
123429108 5275 Viridiplantae View MSA
121348362 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.182        
cufflinks 0.458       High
cufflinks 0.253        
cufflinks 0.045     Low Low
cufflinks 0.487       High
cufflinks 0.055     Low Low
cufflinks 0.048     Low Low
cufflinks 0.287        
cufflinks 0.122        

0 Strain