Gene : Medtr8g107340 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23180:SF290 - C2 DOMAIN-CONTAINING PROTEIN-RELATED Description:  calcium-dependent lipid-binding (CaLB domain) family protein
Genomic Order:  5760 Name:  ? Medtr8g107340
Secondary Identifier:  ? PAC:31070770
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g107340 0.5kb upstream 0.5kb upstream 1397   true chr8: 45347248-45348644 Medicago truncatula
Medtr8g107340 0.5kb upstream 0.5kb upstream 500   false chr8: 45347248-45347747 Medicago truncatula
Medtr8g107340 0.5kb downstream 0.5kb downstream 1397   true chr8: 45347748-45349144 Medicago truncatula
Medtr8g107340 0.5kb downstream 0.5kb downstream 500   false chr8: 45348645-45349144 Medicago truncatula
Medtr8g107340 1.0kb upstream 1.0kb upstream 1897   true chr8: 45346748-45348644 Medicago truncatula
Medtr8g107340 1.0kb upstream 1.0kb upstream 1000   false chr8: 45346748-45347747 Medicago truncatula
Medtr8g107340 1.0kb downstream 1.0kb downstream 1897   true chr8: 45347748-45349644 Medicago truncatula
Medtr8g107340 1.0kb downstream 1.0kb downstream 1000   false chr8: 45348645-45349644 Medicago truncatula
Medtr8g107340 2.0kb upstream 2.0kb upstream 2897   true chr8: 45345748-45348644 Medicago truncatula
Medtr8g107340 2.0kb upstream 2.0kb upstream 2000   false chr8: 45345748-45347747 Medicago truncatula
Medtr8g107340 2.0kb downstream 2.0kb downstream 2897   true chr8: 45347748-45350644 Medicago truncatula
Medtr8g107340 2.0kb downstream 2.0kb downstream 2000   false chr8: 45348645-45350644 Medicago truncatula
Medtr8g107340 5.0kb upstream 5.0kb upstream 5897   true chr8: 45342748-45348644 Medicago truncatula
Medtr8g107340 5.0kb upstream 5.0kb upstream 5000   false chr8: 45342748-45347747 Medicago truncatula
Medtr8g107340 5.0kb downstream 5.0kb downstream 5897   true chr8: 45347748-45353644 Medicago truncatula
Medtr8g107340 5.0kb downstream 5.0kb downstream 5000   false chr8: 45348645-45353644 Medicago truncatula
Medtr8g107340 10.0kb upstream 10.0kb upstream 10897   true chr8: 45337748-45348644 Medicago truncatula
Medtr8g107340 10.0kb upstream 10.0kb upstream 10000   false chr8: 45337748-45347747 Medicago truncatula
Medtr8g107340 10.0kb downstream 10.0kb downstream 10897   true chr8: 45347748-45358644 Medicago truncatula
Medtr8g107340 10.0kb downstream 10.0kb downstream 10000   false chr8: 45348645-45358644 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311894 5265 Fabidae View MSA
124069795 5270 Rosid View MSA
123747243 5271 Pentapetalae View MSA
122796022 5272 Eudicot View MSA
122048793 5273 Angiosperm View MSA
121311115 5274 Embryophyte View MSA
123348457 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.042     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain