Gene : Medtr8g107620 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10161 - TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5 Description:  purple acid phosphatase family protein
Genomic Order:  5778 Name:  ? Medtr8g107620
Secondary Identifier:  ? PAC:31076382
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5083 Medicago truncatula pathologic  
Mtruncatula PWY-6348 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g107620 0.5kb upstream 0.5kb upstream 2615   true chr8: 45500291-45502905 Medicago truncatula
Medtr8g107620 0.5kb upstream 0.5kb upstream 500   false chr8: 45502406-45502905 Medicago truncatula
Medtr8g107620 0.5kb downstream 0.5kb downstream 2615   true chr8: 45499791-45502405 Medicago truncatula
Medtr8g107620 0.5kb downstream 0.5kb downstream 500   false chr8: 45499791-45500290 Medicago truncatula
Medtr8g107620 1.0kb upstream 1.0kb upstream 3115   true chr8: 45500291-45503405 Medicago truncatula
Medtr8g107620 1.0kb upstream 1.0kb upstream 1000   false chr8: 45502406-45503405 Medicago truncatula
Medtr8g107620 1.0kb downstream 1.0kb downstream 3115   true chr8: 45499291-45502405 Medicago truncatula
Medtr8g107620 1.0kb downstream 1.0kb downstream 1000   false chr8: 45499291-45500290 Medicago truncatula
Medtr8g107620 2.0kb upstream 2.0kb upstream 4115   true chr8: 45500291-45504405 Medicago truncatula
Medtr8g107620 2.0kb upstream 2.0kb upstream 2000   false chr8: 45502406-45504405 Medicago truncatula
Medtr8g107620 2.0kb downstream 2.0kb downstream 4115   true chr8: 45498291-45502405 Medicago truncatula
Medtr8g107620 2.0kb downstream 2.0kb downstream 2000   false chr8: 45498291-45500290 Medicago truncatula
Medtr8g107620 5.0kb upstream 5.0kb upstream 7115   true chr8: 45500291-45507405 Medicago truncatula
Medtr8g107620 5.0kb upstream 5.0kb upstream 5000   false chr8: 45502406-45507405 Medicago truncatula
Medtr8g107620 5.0kb downstream 5.0kb downstream 7115   true chr8: 45495291-45502405 Medicago truncatula
Medtr8g107620 5.0kb downstream 5.0kb downstream 5000   false chr8: 45495291-45500290 Medicago truncatula
Medtr8g107620 10.0kb upstream 10.0kb upstream 12115   true chr8: 45500291-45512405 Medicago truncatula
Medtr8g107620 10.0kb upstream 10.0kb upstream 10000   false chr8: 45502406-45512405 Medicago truncatula
Medtr8g107620 10.0kb downstream 10.0kb downstream 12115   true chr8: 45490291-45502405 Medicago truncatula
Medtr8g107620 10.0kb downstream 10.0kb downstream 10000   false chr8: 45490291-45500290 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315085 5265 Fabidae View MSA
124061132 5270 Rosid View MSA
123743122 5271 Pentapetalae View MSA
122795933 5272 Eudicot View MSA
122045102 5273 Angiosperm View MSA
121351076 5274 Embryophyte View MSA
123427142 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.556     High  
cufflinks 17.067     High  
cufflinks 9.788        
cufflinks 0.03     Low Low
cufflinks 10.461     High  
cufflinks 0.895        
cufflinks 2.793        
cufflinks 15.174     High  
cufflinks 0.282       Low

0 Strain