Gene : Medtr0376s0020 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR23076//PTHR23076:SF69 - METALLOPROTEASE M41 FTSH Description:  ATP-dependent zinc metalloprotease FTSH protein
Genomic Order:  1 Name:  ? Medtr0376s0020
Secondary Identifier:  ? PAC:31061868
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0376s0020 0.5kb upstream 0.5kb upstream 3464 true scaffold0376: 2108-5571 Medicago truncatula
Medtr0376s0020 0.5kb upstream 0.5kb upstream 500 false scaffold0376: 2108-2607 Medicago truncatula
Medtr0376s0020 0.5kb downstream 0.5kb downstream 3464 true scaffold0376: 2608-6071 Medicago truncatula
Medtr0376s0020 0.5kb downstream 0.5kb downstream 500 false scaffold0376: 5572-6071 Medicago truncatula
Medtr0376s0020 1.0kb upstream 1.0kb upstream 3964 true scaffold0376: 1608-5571 Medicago truncatula
Medtr0376s0020 1.0kb upstream 1.0kb upstream 1000 false scaffold0376: 1608-2607 Medicago truncatula
Medtr0376s0020 1.0kb downstream 1.0kb downstream 3964 true scaffold0376: 2608-6571 Medicago truncatula
Medtr0376s0020 1.0kb downstream 1.0kb downstream 1000 false scaffold0376: 5572-6571 Medicago truncatula
Medtr0376s0020 2.0kb upstream 2.0kb upstream 4964 true scaffold0376: 608-5571 Medicago truncatula
Medtr0376s0020 2.0kb upstream 2.0kb upstream 2000 false scaffold0376: 608-2607 Medicago truncatula
Medtr0376s0020 2.0kb downstream 2.0kb downstream 4964 true scaffold0376: 2608-7571 Medicago truncatula
Medtr0376s0020 2.0kb downstream 2.0kb downstream 2000 false scaffold0376: 5572-7571 Medicago truncatula
Medtr0376s0020 5.0kb upstream 5.0kb upstream 5571 true scaffold0376: 1-5571 Medicago truncatula
Medtr0376s0020 5.0kb upstream 5.0kb upstream 2607 false scaffold0376: 1-2607 Medicago truncatula
Medtr0376s0020 5.0kb downstream 5.0kb downstream 7964 true scaffold0376: 2608-10571 Medicago truncatula
Medtr0376s0020 5.0kb downstream 5.0kb downstream 5000 false scaffold0376: 5572-10571 Medicago truncatula
Medtr0376s0020 10.0kb upstream 10.0kb upstream 5571 true scaffold0376: 1-5571 Medicago truncatula
Medtr0376s0020 10.0kb upstream 10.0kb upstream 2607 false scaffold0376: 1-2607 Medicago truncatula
Medtr0376s0020 10.0kb downstream 10.0kb downstream 12964 true scaffold0376: 2608-15571 Medicago truncatula
Medtr0376s0020 10.0kb downstream 10.0kb downstream 10000 false scaffold0376: 5572-15571 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310077 5265 Fabidae View MSA
124060614 5270 Rosid View MSA
123737451 5271 Pentapetalae View MSA
122792150 5272 Eudicot View MSA
122046642 5273 Angiosperm View MSA
121346512 5274 Embryophyte View MSA
123425128 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain