Gene : Medtr0508s0010 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12642:SF0 - RIBOSOME BIOGENESIS PROTEIN NSA2 HOMOLOG Description:  ribosomal protein S8e family protein
Genomic Order:  1 Name:  ? Medtr0508s0010
Secondary Identifier:  ? PAC:31100897
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0508s0010 0.5kb upstream 0.5kb upstream 4317 true scaffold0508: 6314-10630 Medicago truncatula
Medtr0508s0010 0.5kb upstream 0.5kb upstream 500 false scaffold0508: 6314-6813 Medicago truncatula
Medtr0508s0010 0.5kb downstream 0.5kb downstream 4317 true scaffold0508: 6814-11130 Medicago truncatula
Medtr0508s0010 0.5kb downstream 0.5kb downstream 500 false scaffold0508: 10631-11130 Medicago truncatula
Medtr0508s0010 1.0kb upstream 1.0kb upstream 4817 true scaffold0508: 5814-10630 Medicago truncatula
Medtr0508s0010 1.0kb upstream 1.0kb upstream 1000 false scaffold0508: 5814-6813 Medicago truncatula
Medtr0508s0010 1.0kb downstream 1.0kb downstream 4817 true scaffold0508: 6814-11630 Medicago truncatula
Medtr0508s0010 1.0kb downstream 1.0kb downstream 1000 false scaffold0508: 10631-11630 Medicago truncatula
Medtr0508s0010 2.0kb upstream 2.0kb upstream 5817 true scaffold0508: 4814-10630 Medicago truncatula
Medtr0508s0010 2.0kb upstream 2.0kb upstream 2000 false scaffold0508: 4814-6813 Medicago truncatula
Medtr0508s0010 2.0kb downstream 2.0kb downstream 5584 true scaffold0508: 6814-12397 Medicago truncatula
Medtr0508s0010 2.0kb downstream 2.0kb downstream 1767 false scaffold0508: 10631-12397 Medicago truncatula
Medtr0508s0010 5.0kb upstream 5.0kb upstream 8817 true scaffold0508: 1814-10630 Medicago truncatula
Medtr0508s0010 5.0kb upstream 5.0kb upstream 5000 false scaffold0508: 1814-6813 Medicago truncatula
Medtr0508s0010 5.0kb downstream 5.0kb downstream 5584 true scaffold0508: 6814-12397 Medicago truncatula
Medtr0508s0010 5.0kb downstream 5.0kb downstream 1767 false scaffold0508: 10631-12397 Medicago truncatula
Medtr0508s0010 10.0kb upstream 10.0kb upstream 10630 true scaffold0508: 1-10630 Medicago truncatula
Medtr0508s0010 10.0kb upstream 10.0kb upstream 6813 false scaffold0508: 1-6813 Medicago truncatula
Medtr0508s0010 10.0kb downstream 10.0kb downstream 5584 true scaffold0508: 6814-12397 Medicago truncatula
Medtr0508s0010 10.0kb downstream 10.0kb downstream 1767 false scaffold0508: 10631-12397 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295859 5265 Fabidae View MSA
124035337 5270 Rosid View MSA
123608864 5271 Pentapetalae View MSA
122796329 5272 Eudicot View MSA
122043464 5273 Angiosperm View MSA
121344863 5274 Embryophyte View MSA
123424224 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.098        
cufflinks 5.454        
cufflinks 5.993        
cufflinks 4.653        
cufflinks 7.509        
cufflinks 1.669       Low
cufflinks 5.287        
cufflinks 6.846        
cufflinks 5.738        

0 Strain