Gene : Medtr0462s0020 M. truncatula Mt4.0v1
Defline:  (1 of 48) PF02902 - Ulp1 protease family, C-terminal catalytic domain (Peptidase_C48) Description:  Ulp1 protease family, carboxy-terminal domain protein
Genomic Order:  1 Name:  ? Medtr0462s0020
Secondary Identifier:  ? PAC:31076929
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0462s0020 0.5kb upstream 0.5kb upstream 1797 true scaffold0462: 11985-13781 Medicago truncatula
Medtr0462s0020 0.5kb upstream 0.5kb upstream 219 false scaffold0462: 13563-13781 Medicago truncatula
Medtr0462s0020 0.5kb downstream 0.5kb downstream 2078 true scaffold0462: 11485-13562 Medicago truncatula
Medtr0462s0020 0.5kb downstream 0.5kb downstream 500 false scaffold0462: 11485-11984 Medicago truncatula
Medtr0462s0020 1.0kb upstream 1.0kb upstream 1797 true scaffold0462: 11985-13781 Medicago truncatula
Medtr0462s0020 1.0kb upstream 1.0kb upstream 219 false scaffold0462: 13563-13781 Medicago truncatula
Medtr0462s0020 1.0kb downstream 1.0kb downstream 2578 true scaffold0462: 10985-13562 Medicago truncatula
Medtr0462s0020 1.0kb downstream 1.0kb downstream 1000 false scaffold0462: 10985-11984 Medicago truncatula
Medtr0462s0020 2.0kb upstream 2.0kb upstream 1797 true scaffold0462: 11985-13781 Medicago truncatula
Medtr0462s0020 2.0kb upstream 2.0kb upstream 219 false scaffold0462: 13563-13781 Medicago truncatula
Medtr0462s0020 2.0kb downstream 2.0kb downstream 3578 true scaffold0462: 9985-13562 Medicago truncatula
Medtr0462s0020 2.0kb downstream 2.0kb downstream 2000 false scaffold0462: 9985-11984 Medicago truncatula
Medtr0462s0020 5.0kb upstream 5.0kb upstream 1797 true scaffold0462: 11985-13781 Medicago truncatula
Medtr0462s0020 5.0kb upstream 5.0kb upstream 219 false scaffold0462: 13563-13781 Medicago truncatula
Medtr0462s0020 5.0kb downstream 5.0kb downstream 6578 true scaffold0462: 6985-13562 Medicago truncatula
Medtr0462s0020 5.0kb downstream 5.0kb downstream 5000 false scaffold0462: 6985-11984 Medicago truncatula
Medtr0462s0020 10.0kb upstream 10.0kb upstream 1797 true scaffold0462: 11985-13781 Medicago truncatula
Medtr0462s0020 10.0kb upstream 10.0kb upstream 219 false scaffold0462: 13563-13781 Medicago truncatula
Medtr0462s0020 10.0kb downstream 10.0kb downstream 11578 true scaffold0462: 1985-13562 Medicago truncatula
Medtr0462s0020 10.0kb downstream 10.0kb downstream 10000 false scaffold0462: 1985-11984 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315054 5265 Fabidae View MSA
124037959 5270 Rosid View MSA
123753147 5271 Pentapetalae View MSA
122797842 5272 Eudicot View MSA
122048825 5273 Angiosperm View MSA
121351710 5274 Embryophyte View MSA
123427809 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain