Gene : Medtr0538s0010 M. truncatula Mt4.0v1
Description:  Defensin related Genomic Order:  1
Name:  ? Medtr0538s0010 Secondary Identifier:  ? PAC:31105886
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0538s0010 0.5kb upstream 0.5kb upstream 759 true scaffold0538: 1-759 Medicago truncatula
Medtr0538s0010 0.5kb upstream 0.5kb upstream 377 false scaffold0538: 1-377 Medicago truncatula
Medtr0538s0010 0.5kb downstream 0.5kb downstream 882 true scaffold0538: 378-1259 Medicago truncatula
Medtr0538s0010 0.5kb downstream 0.5kb downstream 500 false scaffold0538: 760-1259 Medicago truncatula
Medtr0538s0010 1.0kb upstream 1.0kb upstream 759 true scaffold0538: 1-759 Medicago truncatula
Medtr0538s0010 1.0kb upstream 1.0kb upstream 377 false scaffold0538: 1-377 Medicago truncatula
Medtr0538s0010 1.0kb downstream 1.0kb downstream 1382 true scaffold0538: 378-1759 Medicago truncatula
Medtr0538s0010 1.0kb downstream 1.0kb downstream 1000 false scaffold0538: 760-1759 Medicago truncatula
Medtr0538s0010 2.0kb upstream 2.0kb upstream 759 true scaffold0538: 1-759 Medicago truncatula
Medtr0538s0010 2.0kb upstream 2.0kb upstream 377 false scaffold0538: 1-377 Medicago truncatula
Medtr0538s0010 2.0kb downstream 2.0kb downstream 2382 true scaffold0538: 378-2759 Medicago truncatula
Medtr0538s0010 2.0kb downstream 2.0kb downstream 2000 false scaffold0538: 760-2759 Medicago truncatula
Medtr0538s0010 5.0kb upstream 5.0kb upstream 759 true scaffold0538: 1-759 Medicago truncatula
Medtr0538s0010 5.0kb upstream 5.0kb upstream 377 false scaffold0538: 1-377 Medicago truncatula
Medtr0538s0010 5.0kb downstream 5.0kb downstream 5382 true scaffold0538: 378-5759 Medicago truncatula
Medtr0538s0010 5.0kb downstream 5.0kb downstream 5000 false scaffold0538: 760-5759 Medicago truncatula
Medtr0538s0010 10.0kb upstream 10.0kb upstream 759 true scaffold0538: 1-759 Medicago truncatula
Medtr0538s0010 10.0kb upstream 10.0kb upstream 377 false scaffold0538: 1-377 Medicago truncatula
Medtr0538s0010 10.0kb downstream 10.0kb downstream 10382 true scaffold0538: 378-10759 Medicago truncatula
Medtr0538s0010 10.0kb downstream 10.0kb downstream 10000 false scaffold0538: 760-10759 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121649357 5273 Angiosperm View MSA
122288674 5265 Fabidae View MSA
124028880 5270 Rosid View MSA
123602633 5271 Pentapetalae View MSA
122637313 5272 Eudicot View MSA
120921460 5274 Embryophyte View MSA
122962109 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain